dbCAN Logo

Cluster: CGMR009396_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_92033 k141_92033_85 112067 114457 - 1.B.14.6.5
NULL(UNKNOWN) k141_92033 k141_92033_86 114541 114768 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_92033 k141_92033_87 114871 117804 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_92033 k141_92033_88 118309 120228 - GH63
CAZyme k141_92033 k141_92033_89 120230 123361 - GH2
pfam k141_92033 k141_92033_90 123484 125028 - SusD_RagB | SusD-like_3
TC k141_92033 k141_92033_91 125057 128215 - 1.B.14.6.1
TF k141_92033 k141_92033_92 128398 130032 - GerE
CAZyme k141_92033 k141_92033_93 130056 132569 - CE17
NULL(UNKNOWN) k141_92033 k141_92033_94 132834 133556 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_92033 k141_92033_95 133590 135533 + 3.D.10.1.5
TC k141_92033 k141_92033_96 135561 136316 + 3.D.10.1.5
Gene ID: k141_92033_85
Type: TC
Location: 112067 - 114457 (-)
Gene ID: k141_92033_86
Type:
Location: 114541 - 114768 (-)
Gene ID: k141_92033_87
Type:
Location: 114871 - 117804 (-)
Gene ID: k141_92033_88
Type: CAZyme
Location: 118309 - 120228 (-)
Gene ID: k141_92033_89
Type: CAZyme
Location: 120230 - 123361 (-)
Gene ID: k141_92033_90
Type: pfam
Location: 123484 - 125028 (-)
Gene ID: k141_92033_91
Type: TC
Location: 125057 - 128215 (-)
Gene ID: k141_92033_92
Type: TF
Location: 128398 - 130032 (-)
Gene ID: k141_92033_93
Type: CAZyme
Location: 130056 - 132569 (-)
Gene ID: k141_92033_94
Type:
Location: 132834 - 133556 (+)
Gene ID: k141_92033_95
Type: TC
Location: 133590 - 135533 (+)
Gene ID: k141_92033_96
Type: TC
Location: 135561 - 136316 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List