Cluster: CGMR009396_CGC37
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR009396
- CGC Family ID: CGCFAM_00158
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_74389 | k141_74389_19 | 31962 | 34835 | - | GH2 |
| pfam | k141_74389 | k141_74389_20 | 34871 | 36334 | - | Trehalase |
| pfam | k141_74389 | k141_74389_21 | 36441 | 38108 | - | SusD_RagB | SusD-like_3 |
| TC | k141_74389 | k141_74389_22 | 38131 | 41478 | - | 1.B.14.6.1 |
| STP | k141_74389 | k141_74389_23 | 41639 | 42577 | - | FecR |
| NULL(UNKNOWN) | k141_74389 | k141_74389_24 | 42609 | 44555 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_74389 | k141_74389_25 | 44852 | 45184 | + | 2.A.7.1.11 |
| STP | k141_74389 | k141_74389_26 | 45204 | 45758 | - | Sigma70_r2 | Sigma70_r4_2 |
| CAZyme | k141_74389 | k141_74389_27 | 45940 | 48612 | - | GH2 |
| CAZyme | k141_74389 | k141_74389_28 | 48637 | 50688 | - | GH20 |
| CAZyme | k141_74389 | k141_74389_29 | 50814 | 52631 | - | GH123 |
| pfam | k141_74389 | k141_74389_30 | 52708 | 54216 | - | SusD_RagB | SusD-like_3 |
| TC | k141_74389 | k141_74389_31 | 54232 | 57522 | - | 1.B.14.6.1 |
| STP | k141_74389 | k141_74389_32 | 57776 | 58729 | - | FecR |
| STP | k141_74389 | k141_74389_33 | 58891 | 59457 | + | Sigma70_r2 | Sigma70_r4_2 |
| CAZyme | k141_74389 | k141_74389_34 | 59566 | 61143 | - | GH31_19 |
| CAZyme | k141_74389 | k141_74389_35 | 61187 | 63415 | - | GH89 |
| pfam | k141_74389 | k141_74389_36 | 63522 | 65015 | - | SusD_RagB | SusD-like_3 |
| TC | k141_74389 | k141_74389_37 | 65039 | 68563 | - | 1.B.14.6.1 |
Gene ID: k141_74389_19
Type: CAZyme
Location: 31962 - 34835 (-)
Type: CAZyme
Location: 31962 - 34835 (-)
Gene ID: k141_74389_20
Type: pfam
Location: 34871 - 36334 (-)
Type: pfam
Location: 34871 - 36334 (-)
Gene ID: k141_74389_21
Type: pfam
Location: 36441 - 38108 (-)
Type: pfam
Location: 36441 - 38108 (-)
Gene ID: k141_74389_22
Type: TC
Location: 38131 - 41478 (-)
Type: TC
Location: 38131 - 41478 (-)
Gene ID: k141_74389_23
Type: STP
Location: 41639 - 42577 (-)
Type: STP
Location: 41639 - 42577 (-)
Gene ID: k141_74389_24
Type:
Location: 42609 - 44555 (-)
Type:
Location: 42609 - 44555 (-)
Gene ID: k141_74389_25
Type: TC
Location: 44852 - 45184 (+)
Type: TC
Location: 44852 - 45184 (+)
Gene ID: k141_74389_26
Type: STP
Location: 45204 - 45758 (-)
Type: STP
Location: 45204 - 45758 (-)
Gene ID: k141_74389_27
Type: CAZyme
Location: 45940 - 48612 (-)
Type: CAZyme
Location: 45940 - 48612 (-)
Gene ID: k141_74389_28
Type: CAZyme
Location: 48637 - 50688 (-)
Type: CAZyme
Location: 48637 - 50688 (-)
Gene ID: k141_74389_29
Type: CAZyme
Location: 50814 - 52631 (-)
Type: CAZyme
Location: 50814 - 52631 (-)
Gene ID: k141_74389_30
Type: pfam
Location: 52708 - 54216 (-)
Type: pfam
Location: 52708 - 54216 (-)
Gene ID: k141_74389_31
Type: TC
Location: 54232 - 57522 (-)
Type: TC
Location: 54232 - 57522 (-)
Gene ID: k141_74389_32
Type: STP
Location: 57776 - 58729 (-)
Type: STP
Location: 57776 - 58729 (-)
Gene ID: k141_74389_33
Type: STP
Location: 58891 - 59457 (+)
Type: STP
Location: 58891 - 59457 (+)
Gene ID: k141_74389_34
Type: CAZyme
Location: 59566 - 61143 (-)
Type: CAZyme
Location: 59566 - 61143 (-)
Gene ID: k141_74389_35
Type: CAZyme
Location: 61187 - 63415 (-)
Type: CAZyme
Location: 61187 - 63415 (-)
Gene ID: k141_74389_36
Type: pfam
Location: 63522 - 65015 (-)
Type: pfam
Location: 63522 - 65015 (-)
Gene ID: k141_74389_37
Type: TC
Location: 65039 - 68563 (-)
Type: TC
Location: 65039 - 68563 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp019417325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.