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Cluster: CGMR009396_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_20686 k141_20686_18 20311 22413 - GH36
CAZyme k141_20686 k141_20686_19 22410 23804 - GH29
sulfatase k141_20686 k141_20686_20 23816 25270 - S1_27
pfam k141_20686 k141_20686_21 25386 27299 - SusD_RagB | SusD-like_3
TC k141_20686 k141_20686_22 27313 30561 - 1.B.14.6.1
TF k141_20686 k141_20686_23 30855 34877 + HTH_AraC
STP k141_20686 k141_20686_24 34918 35739 - TPR_1
TC k141_20686 k141_20686_25 35906 36748 + 1.A.23.2.1
Gene ID: k141_20686_18
Type: CAZyme
Location: 20311 - 22413 (-)
Gene ID: k141_20686_19
Type: CAZyme
Location: 22410 - 23804 (-)
Gene ID: k141_20686_20
Type: sulfatase
Location: 23816 - 25270 (-)
Gene ID: k141_20686_21
Type: pfam
Location: 25386 - 27299 (-)
Gene ID: k141_20686_22
Type: TC
Location: 27313 - 30561 (-)
Gene ID: k141_20686_23
Type: TF
Location: 30855 - 34877 (+)
Gene ID: k141_20686_24
Type: STP
Location: 34918 - 35739 (-)
Gene ID: k141_20686_25
Type: TC
Location: 35906 - 36748 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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