Cluster: CGMR009396_CGC81
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate: galactan/pectin/host glycan
- Genome ID: CGMR009396
- CGC Family ID: CGCFAM_00485
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_104081 | k141_104081_141 | 170744 | 173107 | + | GH92 |
| TC | k141_104081 | k141_104081_142 | 173117 | 174274 | + | 2.A.1.7.16 |
| CAZyme | k141_104081 | k141_104081_143 | 174276 | 177167 | + | GH38 |
| TF | k141_104081 | k141_104081_144 | 177456 | 178007 | + | GerE |
| STP | k141_104081 | k141_104081_145 | 178088 | 179059 | + | FecR |
| TC | k141_104081 | k141_104081_146 | 179230 | 182568 | + | 1.B.14.6.1 |
| pfam | k141_104081 | k141_104081_147 | 182585 | 184252 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_104081 | k141_104081_148 | 184355 | 186625 | + | GH92 |
| NULL(UNKNOWN) | k141_104081 | k141_104081_149 | 186778 | 186885 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_104081 | k141_104081_150 | 187557 | 188087 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_104081 | k141_104081_151 | 188241 | 191474 | + | 1.B.14.6.1 |
| pfam | k141_104081 | k141_104081_152 | 191500 | 193068 | + | SusD_RagB | SusD-like_2 | SusD-like_3 |
| CAZyme | k141_104081 | k141_104081_153 | 193392 | 195746 | + | GH92 |
| CAZyme | k141_104081 | k141_104081_154 | 195757 | 198027 | + | GH92 |
| CAZyme | k141_104081 | k141_104081_155 | 198061 | 200334 | + | GH92 |
Gene ID: k141_104081_141
Type: CAZyme
Location: 170744 - 173107 (+)
Type: CAZyme
Location: 170744 - 173107 (+)
Gene ID: k141_104081_142
Type: TC
Location: 173117 - 174274 (+)
Type: TC
Location: 173117 - 174274 (+)
Gene ID: k141_104081_143
Type: CAZyme
Location: 174276 - 177167 (+)
Type: CAZyme
Location: 174276 - 177167 (+)
Gene ID: k141_104081_144
Type: TF
Location: 177456 - 178007 (+)
Type: TF
Location: 177456 - 178007 (+)
Gene ID: k141_104081_145
Type: STP
Location: 178088 - 179059 (+)
Type: STP
Location: 178088 - 179059 (+)
Gene ID: k141_104081_146
Type: TC
Location: 179230 - 182568 (+)
Type: TC
Location: 179230 - 182568 (+)
Gene ID: k141_104081_147
Type: pfam
Location: 182585 - 184252 (+)
Type: pfam
Location: 182585 - 184252 (+)
Gene ID: k141_104081_148
Type: CAZyme
Location: 184355 - 186625 (+)
Type: CAZyme
Location: 184355 - 186625 (+)
Gene ID: k141_104081_149
Type:
Location: 186778 - 186885 (-)
Type:
Location: 186778 - 186885 (-)
Gene ID: k141_104081_150
Type:
Location: 187557 - 188087 (+)
Type:
Location: 187557 - 188087 (+)
Gene ID: k141_104081_151
Type: TC
Location: 188241 - 191474 (+)
Type: TC
Location: 188241 - 191474 (+)
Gene ID: k141_104081_152
Type: pfam
Location: 191500 - 193068 (+)
Type: pfam
Location: 191500 - 193068 (+)
Gene ID: k141_104081_153
Type: CAZyme
Location: 193392 - 195746 (+)
Type: CAZyme
Location: 193392 - 195746 (+)
Gene ID: k141_104081_154
Type: CAZyme
Location: 195757 - 198027 (+)
Type: CAZyme
Location: 195757 - 198027 (+)
Gene ID: k141_104081_155
Type: CAZyme
Location: 198061 - 200334 (+)
Type: CAZyme
Location: 198061 - 200334 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp019417325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.