Cluster: CGMR009396_CGC13
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR009396
- CGC Family ID: CGCFAM_00461
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_20686 | k141_20686_104 | 134967 | 137906 | + | GH106 |
| TC | k141_20686 | k141_20686_105 | 138038 | 141166 | + | 1.B.14.6.1 |
| TC | k141_20686 | k141_20686_106 | 141180 | 142703 | + | 8.A.46.1.3 |
| pfam | k141_20686 | k141_20686_107 | 143295 | 144473 | - | GT87 |
| CAZyme | k141_20686 | k141_20686_108 | 144451 | 145431 | - | GT2 |
| CAZyme | k141_20686 | k141_20686_109 | 145428 | 146222 | - | CE4 |
| pfam | k141_20686 | k141_20686_110 | 146384 | 147934 | + | PepSY_TM |
| pfam | k141_20686 | k141_20686_111 | 147943 | 148446 | + | Pyridox_ox_2 |
| CAZyme | k141_20686 | k141_20686_112 | 148634 | 149677 | + | GH130_4 |
| TC | k141_20686 | k141_20686_113 | 149696 | 150958 | + | 2.A.1.33.2 |
| NULL(UNKNOWN) | k141_20686 | k141_20686_114 | 150942 | 152675 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_20686 | k141_20686_115 | 152692 | 155763 | + | 1.B.14.6.1 |
| TC | k141_20686 | k141_20686_116 | 155790 | 157343 | + | 8.A.46.1.6 |
Gene ID: k141_20686_104
Type: CAZyme
Location: 134967 - 137906 (+)
Type: CAZyme
Location: 134967 - 137906 (+)
Gene ID: k141_20686_105
Type: TC
Location: 138038 - 141166 (+)
Type: TC
Location: 138038 - 141166 (+)
Gene ID: k141_20686_106
Type: TC
Location: 141180 - 142703 (+)
Type: TC
Location: 141180 - 142703 (+)
Gene ID: k141_20686_107
Type: pfam
Location: 143295 - 144473 (-)
Type: pfam
Location: 143295 - 144473 (-)
Gene ID: k141_20686_108
Type: CAZyme
Location: 144451 - 145431 (-)
Type: CAZyme
Location: 144451 - 145431 (-)
Gene ID: k141_20686_109
Type: CAZyme
Location: 145428 - 146222 (-)
Type: CAZyme
Location: 145428 - 146222 (-)
Gene ID: k141_20686_110
Type: pfam
Location: 146384 - 147934 (+)
Type: pfam
Location: 146384 - 147934 (+)
Gene ID: k141_20686_111
Type: pfam
Location: 147943 - 148446 (+)
Type: pfam
Location: 147943 - 148446 (+)
Gene ID: k141_20686_112
Type: CAZyme
Location: 148634 - 149677 (+)
Type: CAZyme
Location: 148634 - 149677 (+)
Gene ID: k141_20686_113
Type: TC
Location: 149696 - 150958 (+)
Type: TC
Location: 149696 - 150958 (+)
Gene ID: k141_20686_114
Type:
Location: 150942 - 152675 (+)
Type:
Location: 150942 - 152675 (+)
Gene ID: k141_20686_115
Type: TC
Location: 152692 - 155763 (+)
Type: TC
Location: 152692 - 155763 (+)
Gene ID: k141_20686_116
Type: TC
Location: 155790 - 157343 (+)
Type: TC
Location: 155790 - 157343 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp019417325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.