Genome Details
Selected Rep_genome_ID: CGMR003500
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes muris
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR003500 | 1,819,371 | 97.28% | 0.12% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR003500_CGC6 | CGCFAM_00016 | Yes | 6 | 2 | host glycan |
| CGMR003500_CGC14 | CGCFAM_00331 | Yes | 7 | 4 | alginate |
| CGMR003500_CGC19 | CGCFAM_00540 | Yes | 7 | 4 | pectin |
| CGMR003500_CGC7 | CGCFAM_00564 | Yes | 5 | 2 | |
| CGMR003500_CGC3 | CGCFAM_01177 | Yes | 4 | 1 | |
| CGMR003500_CGC2 | CGCFAM_01741 | Yes | 3 | 1 | |
| CGMR003500_CGC17 | CGCFAM_02171 | Yes | 7 | 1 | |
| CGMR003500_CGC15 | CGCFAM_02756 | Yes | 3 | 1 | |
| CGMR003500_CGC12 | CGCFAM_03696 | Yes | 13 | 3 | |
| CGMR003500_CGC4 | CGCFAM_05345 | Yes | 5 | 2 |
Top CAZyme Families