Cluster: CGMR003500_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate: alginate
- Genome ID: CGMR003500
- CGC Family ID: CGCFAM_00331
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_49938 | k141_49938_93 | 105502 | 106920 | + | CE20 |
| pfam | k141_49938 | k141_49938_94 | 106977 | 107729 | - | adh_short | KR | adh_short_C2 | SDR |
| TC | k141_49938 | k141_49938_95 | 107839 | 109290 | - | 2.A.1.14.25 |
| pfam | k141_49938 | k141_49938_96 | 109297 | 109641 | - | Cupin_2 |
| CAZyme | k141_49938 | k141_49938_97 | 109666 | 111870 | - | PL17 | PL17_2 |
| CAZyme | k141_49938 | k141_49938_98 | 111881 | 114139 | - | PL6 | PL6_1 |
| CAZyme | k141_49938 | k141_49938_99 | 114154 | 115587 | - | PL6 |
Gene ID: k141_49938_93
Type: CAZyme
Location: 105502 - 106920 (+)
Type: CAZyme
Location: 105502 - 106920 (+)
Gene ID: k141_49938_94
Type: pfam
Location: 106977 - 107729 (-)
Type: pfam
Location: 106977 - 107729 (-)
Gene ID: k141_49938_95
Type: TC
Location: 107839 - 109290 (-)
Type: TC
Location: 107839 - 109290 (-)
Gene ID: k141_49938_96
Type: pfam
Location: 109297 - 109641 (-)
Type: pfam
Location: 109297 - 109641 (-)
Gene ID: k141_49938_97
Type: CAZyme
Location: 109666 - 111870 (-)
Type: CAZyme
Location: 109666 - 111870 (-)
Gene ID: k141_49938_98
Type: CAZyme
Location: 111881 - 114139 (-)
Type: CAZyme
Location: 111881 - 114139 (-)
Gene ID: k141_49938_99
Type: CAZyme
Location: 114154 - 115587 (-)
Type: CAZyme
Location: 114154 - 115587 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes muris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.