Cluster: CGMR003500_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR003500
- CGC Family ID: CGCFAM_02171
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_282494 | k141_282494_21 | 32510 | 34498 | + | 3.D.1.9.1 |
| TC | k141_282494 | k141_282494_22 | 34501 | 35415 | + | 3.D.1.9.3 |
| NULL(UNKNOWN) | k141_282494 | k141_282494_23 | 35412 | 36041 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_282494 | k141_282494_24 | 36046 | 37455 | + | 3.D.1.9.1 |
| TC | k141_282494 | k141_282494_25 | 37452 | 38981 | + | 3.D.1.9.3 |
| NULL(UNKNOWN) | k141_282494 | k141_282494_26 | 38978 | 39313 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_282494 | k141_282494_27 | 39406 | 41199 | - | CE8 |
Gene ID: k141_282494_21
Type: TC
Location: 32510 - 34498 (+)
Type: TC
Location: 32510 - 34498 (+)
Gene ID: k141_282494_22
Type: TC
Location: 34501 - 35415 (+)
Type: TC
Location: 34501 - 35415 (+)
Gene ID: k141_282494_23
Type:
Location: 35412 - 36041 (+)
Type:
Location: 35412 - 36041 (+)
Gene ID: k141_282494_24
Type: TC
Location: 36046 - 37455 (+)
Type: TC
Location: 36046 - 37455 (+)
Gene ID: k141_282494_25
Type: TC
Location: 37452 - 38981 (+)
Type: TC
Location: 37452 - 38981 (+)
Gene ID: k141_282494_26
Type:
Location: 38978 - 39313 (+)
Type:
Location: 38978 - 39313 (+)
Gene ID: k141_282494_27
Type: CAZyme
Location: 39406 - 41199 (-)
Type: CAZyme
Location: 39406 - 41199 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes muris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.