Cluster: CGMR003500_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR003500
- CGC Family ID: CGCFAM_00564
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_274939 | k141_274939_14 | 20148 | 21593 | + | 2.A.1.14.25 |
| pfam | k141_274939 | k141_274939_15 | 21610 | 23067 | + | Mannitol_dh | Mannitol_dh_C |
| pfam | k141_274939 | k141_274939_16 | 23140 | 24630 | + | GD_AH_second | SAF | GD_AH_C |
| CAZyme | k141_274939 | k141_274939_17 | 24713 | 25708 | + | CE8 |
| CAZyme | k141_274939 | k141_274939_18 | 25705 | 27345 | + | CBM91 | GH43_10 |
Gene ID: k141_274939_14
Type: TC
Location: 20148 - 21593 (+)
Type: TC
Location: 20148 - 21593 (+)
Gene ID: k141_274939_15
Type: pfam
Location: 21610 - 23067 (+)
Type: pfam
Location: 21610 - 23067 (+)
Gene ID: k141_274939_16
Type: pfam
Location: 23140 - 24630 (+)
Type: pfam
Location: 23140 - 24630 (+)
Gene ID: k141_274939_17
Type: CAZyme
Location: 24713 - 25708 (+)
Type: CAZyme
Location: 24713 - 25708 (+)
Gene ID: k141_274939_18
Type: CAZyme
Location: 25705 - 27345 (+)
Type: CAZyme
Location: 25705 - 27345 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes muris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_274939_17 | vegetarian > vegan | 1.48523 | 0.00085 |