Genome Details
Selected Rep_genome_ID: C37.bin_6
Total Genomes Found: 9
Total Genomes Found: 9
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Hominicoprocola
Species
Hominicoprocola sp003522105
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C37.bin_6 | 2,548,806 | 98.66% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR028691 | 1,609,922 | 94.63% | 1.05% | China | Asia | CGMR |
| CGMR031577 | 1,807,851 | 97.76% | 0.67% | China | Asia | CGMR |
| CGMR037579 | 1,635,071 | 93.4% | 4.25% | China | Asia | CGMR |
| CGMR099785 | 1,735,393 | 93.9% | 0.84% | China | Asia | CGMR |
| HRGMv2_2795 | 1,956,008 | 98.43% | 0% | United Kingdom | Europe | HRGM |
| MGYG000004165 | 1,950,565 | 97.82% | 0% | United Kingdom | Europe | UHGG |
| Rep_3172 | 1,770,708 | 97.0008% | 0% | NA | NA | WIS |
| SW072_bin.105 | 1,813,022 | 97.32% | 0.67% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| C37.bin_6_CGC7 | CGCFAM_00004 | Yes | 8 | 3 | alpha-glucan |
| C37.bin_6_CGC2 | CGCFAM_00053 | Yes | 6 | 1 | |
| C37.bin_6_CGC10 | CGCFAM_00257 | Yes | 5 | 1 | |
| C37.bin_6_CGC5 | CGCFAM_01054 | Yes | 5 | 2 | |
| C37.bin_6_CGC8 | CGCFAM_01633 | Yes | 3 | 1 | |
| C37.bin_6_CGC9 | CGCFAM_03071 | Yes | 6 | 1 | |
| C37.bin_6_CGC11 | CGCFAM_05231 | Yes | 5 | 1 | |
| C37.bin_6_CGC6 | CGCFAM_07499 | Yes | 8 | 1 |
Top CAZyme Families