Cluster: C37.bin_6_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: C37.bin_6
- CGC Family ID: CGCFAM_00053
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C37_contig_7 | C37_contig_7_390 | 379391 | 380560 | - | 2.A.4.7.4 |
| NULL(UNKNOWN) | C37_contig_7 | C37_contig_7_391 | 380570 | 381175 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | C37_contig_7 | C37_contig_7_392 | 381291 | 381671 | - | Ribonuc_L-PSP |
| TC | C37_contig_7 | C37_contig_7_393 | 381814 | 382836 | + | 9.A.11.1.1 |
| pfam | C37_contig_7 | C37_contig_7_394 | 382840 | 383196 | + | SpoVAC_SpoVAEB |
| CAZyme | C37_contig_7 | C37_contig_7_395 | 383240 | 384532 | - | GT2 |
Gene ID: C37_contig_7_390
Type: TC
Location: 379391 - 380560 (-)
Type: TC
Location: 379391 - 380560 (-)
Gene ID: C37_contig_7_391
Type:
Location: 380570 - 381175 (-)
Type:
Location: 380570 - 381175 (-)
Gene ID: C37_contig_7_392
Type: pfam
Location: 381291 - 381671 (-)
Type: pfam
Location: 381291 - 381671 (-)
Gene ID: C37_contig_7_393
Type: TC
Location: 381814 - 382836 (+)
Type: TC
Location: 381814 - 382836 (+)
Gene ID: C37_contig_7_394
Type: pfam
Location: 382840 - 383196 (+)
Type: pfam
Location: 382840 - 383196 (+)
Gene ID: C37_contig_7_395
Type: CAZyme
Location: 383240 - 384532 (-)
Type: CAZyme
Location: 383240 - 384532 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Hominicoprocola
Species
Hominicoprocola sp003522105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C37_contig_7_390 | vegetarian > vegan | 2.25516 | 0.00020 |
| C37_contig_7_391 | vegetarian > vegan | 2.31967 | 0.00020 |
| C37_contig_7_392 | vegetarian > vegan | 1.70912 | 0.00020 |
| C37_contig_7_393 | vegetarian > vegan | 1.73449 | 0.00020 |
| C37_contig_7_394 | vegetarian > vegan | 1.39385 | 0.00020 |
| C37_contig_7_395 | vegetarian > vegan | 2.09180 | 0.00020 |