Cluster: C37.bin_6_CGC7
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: C37.bin_6
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C37_contig_12 | C37_contig_12_368 | 406271 | 407599 | - | 2.A.37.3.3 |
| TC | C37_contig_12 | C37_contig_12_369 | 407767 | 409413 | - | 3.A.1.5.1 |
| TC | C37_contig_12 | C37_contig_12_370 | 409628 | 410782 | - | 3.A.18.1.1 |
| CAZyme | C37_contig_12 | C37_contig_12_371 | 410907 | 413315 | - | GT35 |
| CAZyme | C37_contig_12 | C37_contig_12_372 | 413334 | 414767 | - | GT5 |
| pfam | C37_contig_12 | C37_contig_12_373 | 414799 | 415911 | - | NTP_transferase | Hexapep_GlmU |
| pfam | C37_contig_12 | C37_contig_12_374 | 415908 | 417116 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | C37_contig_12 | C37_contig_12_375 | 417136 | 419076 | - | CBM48 | GH13_9 |
Gene ID: C37_contig_12_368
Type: TC
Location: 406271 - 407599 (-)
Type: TC
Location: 406271 - 407599 (-)
Gene ID: C37_contig_12_369
Type: TC
Location: 407767 - 409413 (-)
Type: TC
Location: 407767 - 409413 (-)
Gene ID: C37_contig_12_370
Type: TC
Location: 409628 - 410782 (-)
Type: TC
Location: 409628 - 410782 (-)
Gene ID: C37_contig_12_371
Type: CAZyme
Location: 410907 - 413315 (-)
Type: CAZyme
Location: 410907 - 413315 (-)
Gene ID: C37_contig_12_372
Type: CAZyme
Location: 413334 - 414767 (-)
Type: CAZyme
Location: 413334 - 414767 (-)
Gene ID: C37_contig_12_373
Type: pfam
Location: 414799 - 415911 (-)
Type: pfam
Location: 414799 - 415911 (-)
Gene ID: C37_contig_12_374
Type: pfam
Location: 415908 - 417116 (-)
Type: pfam
Location: 415908 - 417116 (-)
Gene ID: C37_contig_12_375
Type: CAZyme
Location: 417136 - 419076 (-)
Type: CAZyme
Location: 417136 - 419076 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Hominicoprocola
Species
Hominicoprocola sp003522105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C37_contig_12_368 | vegetarian > vegan | 2.18870 | 0.00020 |
| C37_contig_12_369 | vegetarian > vegan | 2.28764 | 0.00020 |
| C37_contig_12_370 | vegetarian > vegan | 1.31625 | 0.00020 |
| C37_contig_12_371 | vegetarian > vegan | 1.49098 | 0.00020 |
| C37_contig_12_372 | vegetarian > vegan | 1.75860 | 0.00020 |
| C37_contig_12_373 | vegetarian > vegan | 2.22567 | 0.00020 |
| C37_contig_12_374 | vegetarian > vegan | 1.67883 | 0.00020 |
| C37_contig_12_375 | vegetarian > vegan | 1.87441 | 0.00020 |