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Cluster: C37.bin_6_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C37_contig_12 C37_contig_12_138 151762 152478 + 2.A.78.1.1
TC C37_contig_12 C37_contig_12_139 152475 152801 + 2.A.78.1.1
pfam C37_contig_12 C37_contig_12_140 152839 153486 + Cyclase
NULL(UNKNOWN) C37_contig_12 C37_contig_12_141 153571 153804 + NULL(UNKNOWN)
[View Structural Homologs]
TC C37_contig_12 C37_contig_12_142 153885 155366 - 2.A.66.1.33
pfam C37_contig_12 C37_contig_12_143 161546 162340 - SLH | SLH
pfam C37_contig_12 C37_contig_12_144 162519 163145 + Collagen | Collagen | Collagen
CAZyme C37_contig_12 C37_contig_12_145 163268 164302 + GT2
Gene ID: C37_contig_12_138
Type: TC
Location: 151762 - 152478 (+)
Gene ID: C37_contig_12_139
Type: TC
Location: 152475 - 152801 (+)
Gene ID: C37_contig_12_140
Type: pfam
Location: 152839 - 153486 (+)
Gene ID: C37_contig_12_141
Type:
Location: 153571 - 153804 (+)
Gene ID: C37_contig_12_142
Type: TC
Location: 153885 - 155366 (-)
Gene ID: C37_contig_12_143
Type: pfam
Location: 161546 - 162340 (-)
Gene ID: C37_contig_12_144
Type: pfam
Location: 162519 - 163145 (+)
Gene ID: C37_contig_12_145
Type: CAZyme
Location: 163268 - 164302 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C37_contig_12_138 vegetarian > vegan 2.40185 0.00020
C37_contig_12_139 vegetarian > vegan 2.19964 0.00020
C37_contig_12_140 vegetarian > vegan 2.44132 0.00020
C37_contig_12_141 vegetarian > vegan 2.54003 0.00020
C37_contig_12_142 vegetarian > vegan 2.14091 0.00020
C37_contig_12_143 vegetarian > vegan 2.01560 0.00020
C37_contig_12_145 vegetarian > vegan 1.78914 0.00020

🧭 Explore Read Mapping of CGC

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