Cluster: C37.bin_6_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: C37.bin_6
- CGC Family ID: CGCFAM_03071
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C37_contig_2355 | C37_contig_2355_64 | 65759 | 67081 | + | 3.A.1.1.45 |
| TC | C37_contig_2355 | C37_contig_2355_65 | 67253 | 68167 | + | 3.A.1.1.45 |
| TC | C37_contig_2355 | C37_contig_2355_66 | 68167 | 69069 | + | 3.A.1.1.45 |
| CAZyme | C37_contig_2355 | C37_contig_2355_67 | 69101 | 70588 | + | GH77 |
| TC | C37_contig_2355 | C37_contig_2355_68 | 70726 | 71754 | - | 3.A.1.11.2 |
| TC | C37_contig_2355 | C37_contig_2355_69 | 71751 | 72443 | - | 3.A.1.8.2 |
Gene ID: C37_contig_2355_64
Type: TC
Location: 65759 - 67081 (+)
Type: TC
Location: 65759 - 67081 (+)
Gene ID: C37_contig_2355_65
Type: TC
Location: 67253 - 68167 (+)
Type: TC
Location: 67253 - 68167 (+)
Gene ID: C37_contig_2355_66
Type: TC
Location: 68167 - 69069 (+)
Type: TC
Location: 68167 - 69069 (+)
Gene ID: C37_contig_2355_67
Type: CAZyme
Location: 69101 - 70588 (+)
Type: CAZyme
Location: 69101 - 70588 (+)
Gene ID: C37_contig_2355_68
Type: TC
Location: 70726 - 71754 (-)
Type: TC
Location: 70726 - 71754 (-)
Gene ID: C37_contig_2355_69
Type: TC
Location: 71751 - 72443 (-)
Type: TC
Location: 71751 - 72443 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Hominicoprocola
Species
Hominicoprocola sp003522105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C37_contig_2355_64 | vegetarian > vegan | 1.72363 | 0.00020 |
| C37_contig_2355_66 | vegetarian > vegan | 1.10427 | 0.00020 |
| C37_contig_2355_67 | vegetarian > vegan | 1.52745 | 0.00020 |
| C37_contig_2355_68 | vegetarian > vegan | 1.39789 | 0.00020 |
| C37_contig_2355_69 | vegetarian > vegan | 1.32819 | 0.00020 |