Cluster: C37.bin_6_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C37.bin_6
- CGC Family ID: CGCFAM_00257
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C37_contig_2355 | C37_contig_2355_459 | 452041 | 453171 | + | GT28 |
| pfam | C37_contig_2355 | C37_contig_2355_460 | 453168 | 453860 | + | PAP2 |
| TC | C37_contig_2355 | C37_contig_2355_461 | 454169 | 455023 | + | 3.A.1.3.27 |
| TC | C37_contig_2355 | C37_contig_2355_462 | 455166 | 455909 | + | 3.A.1.3.15 |
| TC | C37_contig_2355 | C37_contig_2355_463 | 455893 | 456642 | + | 3.A.1.3.25 |
Gene ID: C37_contig_2355_459
Type: CAZyme
Location: 452041 - 453171 (+)
Type: CAZyme
Location: 452041 - 453171 (+)
Gene ID: C37_contig_2355_460
Type: pfam
Location: 453168 - 453860 (+)
Type: pfam
Location: 453168 - 453860 (+)
Gene ID: C37_contig_2355_461
Type: TC
Location: 454169 - 455023 (+)
Type: TC
Location: 454169 - 455023 (+)
Gene ID: C37_contig_2355_462
Type: TC
Location: 455166 - 455909 (+)
Type: TC
Location: 455166 - 455909 (+)
Gene ID: C37_contig_2355_463
Type: TC
Location: 455893 - 456642 (+)
Type: TC
Location: 455893 - 456642 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Hominicoprocola
Species
Hominicoprocola sp003522105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C37_contig_2355_459 | vegetarian > vegan | 2.31819 | 0.00020 |
| C37_contig_2355_460 | vegetarian > vegan | 1.67926 | 0.00020 |
| C37_contig_2355_461 | vegetarian > vegan | 1.72078 | 0.00020 |
| C37_contig_2355_462 | vegetarian > vegan | 1.97155 | 0.00020 |