Genome Details
Selected Rep_genome_ID: C130.CMAG_5
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp003469205
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C130.CMAG_5 | 2,507,411 | 100% | 0.81% | China(Inner Mongolia) | Asia | IMGG |
| HRGMv2_1064 | 2,278,650 | 100% | 0.806% | China | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| C130.CMAG_5_CGC6 | CGCFAM_00006 | Yes | 10 | 4 | |
| C130.CMAG_5_CGC9 | CGCFAM_00019 | Yes | 7 | 1 | |
| C130.CMAG_5_CGC20 | CGCFAM_00154 | Yes | 8 | 2 | |
| C130.CMAG_5_CGC4 | CGCFAM_00182 | Yes | 11 | 1 | |
| C130.CMAG_5_CGC17 | CGCFAM_00289 | Yes | 5 | 1 | |
| C130.CMAG_5_CGC8 | CGCFAM_00398 | Yes | 3 | 1 | |
| C130.CMAG_5_CGC5 | CGCFAM_00505 | Yes | 4 | 2 | |
| C130.CMAG_5_CGC16 | CGCFAM_02159 | Yes | 7 | 1 | |
| C130.CMAG_5_CGC24 | CGCFAM_03024 | Yes | 3 | 1 |
Top CAZyme Families