Cluster: C130.CMAG_5_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C130.CMAG_5
- CGC Family ID: CGCFAM_00289
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C130_contig_589 | C130_contig_589_1734 | 2042446 | 2043852 | + | CE4 |
| NULL(UNKNOWN) | C130_contig_589 | C130_contig_589_1735 | 2043714 | 2044109 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | C130_contig_589 | C130_contig_589_1736 | 2044148 | 2045992 | + | CBS | CBS |
| TC | C130_contig_589 | C130_contig_589_1737 | 2046001 | 2047263 | + | 2.A.55.3.6 |
| TC | C130_contig_589 | C130_contig_589_1738 | 2047805 | 2050048 | - | 9.B.97.5.1 |
Gene ID: C130_contig_589_1734
Type: CAZyme
Location: 2042446 - 2043852 (+)
Type: CAZyme
Location: 2042446 - 2043852 (+)
Gene ID: C130_contig_589_1735
Type:
Location: 2043714 - 2044109 (-)
Type:
Location: 2043714 - 2044109 (-)
Gene ID: C130_contig_589_1736
Type: STP
Location: 2044148 - 2045992 (+)
Type: STP
Location: 2044148 - 2045992 (+)
Gene ID: C130_contig_589_1737
Type: TC
Location: 2046001 - 2047263 (+)
Type: TC
Location: 2046001 - 2047263 (+)
Gene ID: C130_contig_589_1738
Type: TC
Location: 2047805 - 2050048 (-)
Type: TC
Location: 2047805 - 2050048 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp003469205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.