dbCAN Logo

Cluster: C130.CMAG_5_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C130_contig_589 C130_contig_589_1672 1958699 1959187 + 4.A.6.1.9
TC C130_contig_589 C130_contig_589_1673 1959260 1960117 + 4.A.6.1.1
pfam C130_contig_589 C130_contig_589_1674 1960117 1960257 + EIID-AGA
TC C130_contig_589 C130_contig_589_1675 1960339 1960944 + 4.A.6.1.1
NULL(UNKNOWN) C130_contig_589 C130_contig_589_1676 1961140 1961466 + NULL(UNKNOWN)
[View Structural Homologs]
TF C130_contig_589 C130_contig_589_1677 1961571 1962011 + MarR
CAZyme C130_contig_589 C130_contig_589_1678 1962524 1968937 + GH31_18
Gene ID: C130_contig_589_1672
Type: TC
Location: 1958699 - 1959187 (+)
Gene ID: C130_contig_589_1673
Type: TC
Location: 1959260 - 1960117 (+)
Gene ID: C130_contig_589_1674
Type: pfam
Location: 1960117 - 1960257 (+)
Gene ID: C130_contig_589_1675
Type: TC
Location: 1960339 - 1960944 (+)
Gene ID: C130_contig_589_1676
Type:
Location: 1961140 - 1961466 (+)
Gene ID: C130_contig_589_1677
Type: TF
Location: 1961571 - 1962011 (+)
Gene ID: C130_contig_589_1678
Type: CAZyme
Location: 1962524 - 1968937 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C130_contig_589_1678 vegetarian > omnivore 1.35758 0.01084
C130_contig_589_1678 vegetarian > vegan 2.14501 0.00969

🧭 Explore Read Mapping of CGC

← Back to Cluster List