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Cluster: C130.CMAG_5_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C130_contig_589 C130_contig_589_1770 2087812 2090580 - 3.A.3.4.1
STP C130_contig_589 C130_contig_589_1771 2091017 2091697 + Pribosyltran
TF C130_contig_589 C130_contig_589_1772 2092110 2092964 - HTH_6
CAZyme C130_contig_589 C130_contig_589_1773 2093131 2095722 - GH106
TF C130_contig_589 C130_contig_589_1774 2095837 2096829 + 0035607
CAZyme C130_contig_589 C130_contig_589_1775 2096997 2098445 + GH1
pfam C130_contig_589 C130_contig_589_1776 2098709 2099971 - HTH_38
TC C130_contig_589 C130_contig_589_1777 2100220 2100756 + 4.A.1.2.6
Gene ID: C130_contig_589_1770
Type: TC
Location: 2087812 - 2090580 (-)
Gene ID: C130_contig_589_1771
Type: STP
Location: 2091017 - 2091697 (+)
Gene ID: C130_contig_589_1772
Type: TF
Location: 2092110 - 2092964 (-)
Gene ID: C130_contig_589_1773
Type: CAZyme
Location: 2093131 - 2095722 (-)
Gene ID: C130_contig_589_1774
Type: TF
Location: 2095837 - 2096829 (+)
Gene ID: C130_contig_589_1775
Type: CAZyme
Location: 2096997 - 2098445 (+)
Gene ID: C130_contig_589_1776
Type: pfam
Location: 2098709 - 2099971 (-)
Gene ID: C130_contig_589_1777
Type: TC
Location: 2100220 - 2100756 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C130_contig_589_1776 vegan > omnivore 2.04280 0.00701
C130_contig_589_1776 vegetarian > omnivore 1.84847 0.01084

🧭 Explore Read Mapping of CGC

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