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Genome Details

Selected Rep_genome_ID: A163.bin_2
Total Genomes Found: 17
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella stercorea
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A163.bin_2 3,244,173 99.26% 0% China(Inner Mongolia) Asia IMGG
CGMR023175 2,641,427 95.25% 0.19% China Asia CGMR
ChuDM_2017_SRR8942392_bin.1 2,626,216 99.25% 0% US North America ELGG
GCF_021614855.1_ASM2161485v1_genomic 2,694,485 97.16% 0.07% NA Africa H3AfricaPhase1
GCF_021616235.1_ASM2161623v1_genomic 2,570,526 97.75% 0.74% NA Africa H3AfricaPhase1
GCF_021621265.1_ASM2162126v1_genomic 3,103,185 98.52% 0.49% NA Africa H3AfricaPhase1
GCF_021626105.1_ASM2162610v1_genomic 2,681,370 95.9% 0.37% NA Africa H3AfricaPhase1
GCF_021626785.1_ASM2162678v1_genomic 2,985,156 97.06% 3.74% NA Africa H3AfricaPhase1
GCF_021627625.1_ASM2162762v1_genomic 2,763,962 96.69% 0.74% NA Africa H3AfricaPhase1
GCF_021627665.1_ASM2162766v1_genomic 2,468,362 95.43% 0% NA Africa H3AfricaPhase1
GCF_021630825.1_ASM2163082v1_genomic 3,536,243 99.07% 0.73% NA Africa H3AfricaPhase1
GCF_021631635.1_ASM2163163v1_genomic 2,570,609 96.48% 0% NA Africa H3AfricaPhase1
GH174_9 3,007,022 99.26% 0% NA Africa H3AfricaPhase2
HRGMv2_0161 2,795,769 99.25% 0% Japan Asia HRGM
Rep_216 3,051,839 99.0741% 0% NA NA WIS
SPMP44_bin.130 2,547,047 97.08% 4.44% Singapore Asia SPMP
SPMP82_bin.18 2,411,247 93.75% 0.37% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
A163.bin_2_CGC1 CGCFAM_00013 Yes 4 1
A163.bin_2_CGC25 CGCFAM_00031 Yes 11 3 pectin/galactan
A163.bin_2_CGC19 CGCFAM_00118 Yes 3 1
A163.bin_2_CGC7 CGCFAM_00181 Yes 8 1
A163.bin_2_CGC2 CGCFAM_00254 Yes 3 1
A163.bin_2_CGC4 CGCFAM_00337 Yes 6 1
A163.bin_2_CGC31 CGCFAM_00349 Yes 4 1
A163.bin_2_CGC5 CGCFAM_00376 Yes 5 3 host glycan
A163.bin_2_CGC6 CGCFAM_00548 Yes 11 4
A163.bin_2_CGC13 CGCFAM_00603 Yes 6 1
A163.bin_2_CGC16 CGCFAM_00648 Yes 6 1
A163.bin_2_CGC18 CGCFAM_01887 Yes 3 1
A163.bin_2_CGC9 CGCFAM_01889 Yes 5 2
A163.bin_2_CGC24 CGCFAM_02386 Yes 9 1
A163.bin_2_CGC11 CGCFAM_03050 Yes 4 1
A163.bin_2_CGC14 CGCFAM_03061 Yes 4 1
A163.bin_2_CGC22 CGCFAM_03062 Yes 6 2
A163.bin_2_CGC27 CGCFAM_03063 Yes 7 4
A163.bin_2_CGC10 CGCFAM_04332 Yes 10 1
A163.bin_2_CGC23 CGCFAM_04334 Yes 9 5
A163.bin_2_CGC30 CGCFAM_04335 Yes 4 1
A163.bin_2_CGC12 CGCFAM_06675 Yes 9 1
A163.bin_2_CGC15 CGCFAM_06677 Yes 3 1
A163.bin_2_CGC21 CGCFAM_06678 Yes 11 1
A163.bin_2_CGC28 CGCFAM_06679 Yes 4 1
Top CAZyme Families