Cluster: A163.bin_2_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate: host glycan
- Genome ID: A163.bin_2
- CGC Family ID: CGCFAM_00376
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A163_contig_23 | A163_contig_23_219 | 251636 | 255388 | + | GH85 |
| CAZyme | A163_contig_23 | A163_contig_23_220 | 255498 | 259325 | + | GH85 |
| TC | A163_contig_23 | A163_contig_23_221 | 259404 | 262745 | + | 1.B.14.6.13 |
| TC | A163_contig_23 | A163_contig_23_222 | 262773 | 264629 | + | 8.A.46.2.2 |
| CAZyme | A163_contig_23 | A163_contig_23_223 | 266177 | 269236 | + | GH85 |
Gene ID: A163_contig_23_219
Type: CAZyme
Location: 251636 - 255388 (+)
Type: CAZyme
Location: 251636 - 255388 (+)
Gene ID: A163_contig_23_220
Type: CAZyme
Location: 255498 - 259325 (+)
Type: CAZyme
Location: 255498 - 259325 (+)
Gene ID: A163_contig_23_221
Type: TC
Location: 259404 - 262745 (+)
Type: TC
Location: 259404 - 262745 (+)
Gene ID: A163_contig_23_222
Type: TC
Location: 262773 - 264629 (+)
Type: TC
Location: 262773 - 264629 (+)
Gene ID: A163_contig_23_223
Type: CAZyme
Location: 266177 - 269236 (+)
Type: CAZyme
Location: 266177 - 269236 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella stercorea
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.