Cluster: A163.bin_2_CGC6
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: A163.bin_2
- CGC Family ID: CGCFAM_00548
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A163_contig_23 | A163_contig_23_533 | 672323 | 673372 | + | GT2 |
| CAZyme | A163_contig_23 | A163_contig_23_534 | 673382 | 674218 | + | GT2 |
| CAZyme | A163_contig_23 | A163_contig_23_535 | 674245 | 675285 | + | GT4 |
| pfam | A163_contig_23 | A163_contig_23_536 | 675376 | 676641 | + | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | A163_contig_23 | A163_contig_23_537 | 676677 | 677678 | + | GT2 |
| TC | A163_contig_23 | A163_contig_23_538 | 677678 | 678289 | + | 9.B.18.1.2 |
| pfam | A163_contig_23 | A163_contig_23_539 | 678303 | 679550 | + | DegT_DnrJ_EryC1 | DegT_DnrJ_EryC1 |
| TC | A163_contig_23 | A163_contig_23_540 | 679584 | 681512 | + | 9.B.18.2.1 |
| pfam | A163_contig_23 | A163_contig_23_541 | 681779 | 682246 | - | Lipocalin_8 |
| pfam | A163_contig_23 | A163_contig_23_542 | 682342 | 683934 | - | Caps_assemb_Wzi |
| TC | A163_contig_23 | A163_contig_23_543 | 684112 | 684954 | + | 1.A.30.2.9 |
Gene ID: A163_contig_23_533
Type: CAZyme
Location: 672323 - 673372 (+)
Type: CAZyme
Location: 672323 - 673372 (+)
Gene ID: A163_contig_23_534
Type: CAZyme
Location: 673382 - 674218 (+)
Type: CAZyme
Location: 673382 - 674218 (+)
Gene ID: A163_contig_23_535
Type: CAZyme
Location: 674245 - 675285 (+)
Type: CAZyme
Location: 674245 - 675285 (+)
Gene ID: A163_contig_23_536
Type: pfam
Location: 675376 - 676641 (+)
Type: pfam
Location: 675376 - 676641 (+)
Gene ID: A163_contig_23_537
Type: CAZyme
Location: 676677 - 677678 (+)
Type: CAZyme
Location: 676677 - 677678 (+)
Gene ID: A163_contig_23_538
Type: TC
Location: 677678 - 678289 (+)
Type: TC
Location: 677678 - 678289 (+)
Gene ID: A163_contig_23_539
Type: pfam
Location: 678303 - 679550 (+)
Type: pfam
Location: 678303 - 679550 (+)
Gene ID: A163_contig_23_540
Type: TC
Location: 679584 - 681512 (+)
Type: TC
Location: 679584 - 681512 (+)
Gene ID: A163_contig_23_541
Type: pfam
Location: 681779 - 682246 (-)
Type: pfam
Location: 681779 - 682246 (-)
Gene ID: A163_contig_23_542
Type: pfam
Location: 682342 - 683934 (-)
Type: pfam
Location: 682342 - 683934 (-)
Gene ID: A163_contig_23_543
Type: TC
Location: 684112 - 684954 (+)
Type: TC
Location: 684112 - 684954 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella stercorea
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A163_contig_23_543 | vegetarian > vegan | 1.22909 | 0.02177 |