Cluster: A163.bin_2_CGC12
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: A163.bin_2
- CGC Family ID: CGCFAM_06675
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A163_contig_23 | A163_contig_23_1482 | 1689602 | 1690399 | + | GT5 |
| pfam | A163_contig_23 | A163_contig_23_1483 | 1690431 | 1691828 | + | DUF4270 |
| NULL(UNKNOWN) | A163_contig_23 | A163_contig_23_1484 | 1691837 | 1691971 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A163_contig_23 | A163_contig_23_1485 | 1692120 | 1693586 | + | 2.A.47.1.12 |
| TC | A163_contig_23 | A163_contig_23_1486 | 1693665 | 1694795 | + | 3.A.11.1.3 |
| STP | A163_contig_23 | A163_contig_23_1487 | 1694892 | 1696100 | + | Aminotran_1_2 |
| TC | A163_contig_23 | A163_contig_23_1488 | 1696236 | 1697489 | + | 3.A.1.125.1 |
| pfam | A163_contig_23 | A163_contig_23_1489 | 1697525 | 1698133 | + | MMR_HSR1 |
| TC | A163_contig_23 | A163_contig_23_1490 | 1698134 | 1699915 | + | 3.A.1.120.6 |
Gene ID: A163_contig_23_1482
Type: CAZyme
Location: 1689602 - 1690399 (+)
Type: CAZyme
Location: 1689602 - 1690399 (+)
Gene ID: A163_contig_23_1483
Type: pfam
Location: 1690431 - 1691828 (+)
Type: pfam
Location: 1690431 - 1691828 (+)
Gene ID: A163_contig_23_1484
Type:
Location: 1691837 - 1691971 (+)
Type:
Location: 1691837 - 1691971 (+)
Gene ID: A163_contig_23_1485
Type: TC
Location: 1692120 - 1693586 (+)
Type: TC
Location: 1692120 - 1693586 (+)
Gene ID: A163_contig_23_1486
Type: TC
Location: 1693665 - 1694795 (+)
Type: TC
Location: 1693665 - 1694795 (+)
Gene ID: A163_contig_23_1487
Type: STP
Location: 1694892 - 1696100 (+)
Type: STP
Location: 1694892 - 1696100 (+)
Gene ID: A163_contig_23_1488
Type: TC
Location: 1696236 - 1697489 (+)
Type: TC
Location: 1696236 - 1697489 (+)
Gene ID: A163_contig_23_1489
Type: pfam
Location: 1697525 - 1698133 (+)
Type: pfam
Location: 1697525 - 1698133 (+)
Gene ID: A163_contig_23_1490
Type: TC
Location: 1698134 - 1699915 (+)
Type: TC
Location: 1698134 - 1699915 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella stercorea
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A163_contig_23_1489 | vegetarian > vegan | 1.15018 | 0.02678 |