Cluster: A163.bin_2_CGC23
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 5
- Substrate:
- Genome ID: A163.bin_2
- CGC Family ID: CGCFAM_04334
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A163_contig_23 | A163_contig_23_2207 | 2577511 | 2579157 | - | 3.A.1.112.9 |
| pfam | A163_contig_23 | A163_contig_23_2208 | 2579206 | 2580090 | - | NAD_kinase | NAD_kinase_C |
| CAZyme | A163_contig_23 | A163_contig_23_2209 | 2580248 | 2581522 | + | GT4 |
| CAZyme | A163_contig_23 | A163_contig_23_2210 | 2581528 | 2582310 | + | GT2 |
| pfam | A163_contig_23 | A163_contig_23_2211 | 2582431 | 2583525 | + | NTP_transferase | NTP_transf_3 |
| CAZyme | A163_contig_23 | A163_contig_23_2212 | 2583603 | 2585897 | + | CE20 | CE3 |
| CAZyme | A163_contig_23 | A163_contig_23_2213 | 2586066 | 2587604 | + | GH29 |
| NULL(UNKNOWN) | A163_contig_23 | A163_contig_23_2214 | 2587644 | 2589344 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A163_contig_23 | A163_contig_23_2215 | 2589427 | 2592189 | + | GH16_3 |
Gene ID: A163_contig_23_2207
Type: TC
Location: 2577511 - 2579157 (-)
Type: TC
Location: 2577511 - 2579157 (-)
Gene ID: A163_contig_23_2208
Type: pfam
Location: 2579206 - 2580090 (-)
Type: pfam
Location: 2579206 - 2580090 (-)
Gene ID: A163_contig_23_2209
Type: CAZyme
Location: 2580248 - 2581522 (+)
Type: CAZyme
Location: 2580248 - 2581522 (+)
Gene ID: A163_contig_23_2210
Type: CAZyme
Location: 2581528 - 2582310 (+)
Type: CAZyme
Location: 2581528 - 2582310 (+)
Gene ID: A163_contig_23_2211
Type: pfam
Location: 2582431 - 2583525 (+)
Type: pfam
Location: 2582431 - 2583525 (+)
Gene ID: A163_contig_23_2212
Type: CAZyme
Location: 2583603 - 2585897 (+)
Type: CAZyme
Location: 2583603 - 2585897 (+)
Gene ID: A163_contig_23_2213
Type: CAZyme
Location: 2586066 - 2587604 (+)
Type: CAZyme
Location: 2586066 - 2587604 (+)
Gene ID: A163_contig_23_2214
Type:
Location: 2587644 - 2589344 (+)
Type:
Location: 2587644 - 2589344 (+)
Gene ID: A163_contig_23_2215
Type: CAZyme
Location: 2589427 - 2592189 (+)
Type: CAZyme
Location: 2589427 - 2592189 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella stercorea
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.