Differentially Abundant CAZymes in CGCs
Total: 24804 entries| CAZyme Gene ID ↑ | CGC ID | CAZyme Family | Study | Condition Pair | log2FC | FDR P-value | Continent | CGC Family ID | Substrate |
|---|---|---|---|---|---|---|---|---|---|
| HRGMv2_0285_14_32 | HRGMv2_0285_CGC30 | CE12 | Diet (De Filippis et al., 2019) | vegetarian > omnivore | 1.28182 | 0.01622 | Africa | CGCFAM_01477 | |
| HRGMv2_0285_15_40 | HRGMv2_0285_CGC33 | GH109 | Diet (De Filippis et al., 2019) | vegetarian > vegan | 1.10160 | 0.00409 | Africa | NA | |
| HRGMv2_0285_2_138 | HRGMv2_0285_CGC5 | PL1 | Diet (De Filippis et al., 2019) | vegetarian > vegan | 3.54902 | 0.00409 | Africa | CGCFAM_00031 | Pectin Galactan |
| HRGMv2_0285_2_146 | HRGMv2_0285_CGC5 | GH2 | IBD (Lloyd-Price et al., 2019) | UC > CD | 1.35308 | 0.01460 | Africa | CGCFAM_00031 | Pectin Galactan |
| HRGMv2_0285_2_86 | HRGMv2_0285_CGC3 | GH10 | IBD (Lloyd-Price et al., 2019) | UC > CD | 1.23566 | 0.01460 | Africa | CGCFAM_00044 | Beta-mannan Xylan Beta-glucan |
| HRGMv2_0285_2_87 | HRGMv2_0285_CGC3 | GH43 | IBD (Lloyd-Price et al., 2019) | UC > CD | 1.24590 | 0.01460 | Africa | CGCFAM_00044 | Beta-mannan Xylan Beta-glucan |
| HRGMv2_0285_20_12 | HRGMv2_0285_CGC38 | CE4 | IBD (Lloyd-Price et al., 2019) | UC > CD | 1.43183 | 0.01460 | Africa | CGCFAM_00352 | |
| HRGMv2_0285_28_14 | HRGMv2_0285_CGC45 | CE8 | Diet (De Filippis et al., 2019) | vegetarian > vegan | 2.39976 | 0.00409 | Africa | CGCFAM_00048 | |
| HRGMv2_0285_28_26 | HRGMv2_0285_CGC46 | GH13 | IBD (Lloyd-Price et al., 2019) | UC > CD | 1.11595 | 0.01460 | Africa | NA | |
| HRGMv2_0285_33_10 | HRGMv2_0285_CGC48 | GH13 | IBD (Lloyd-Price et al., 2019) | UC > CD | 1.34921 | 0.01460 | Africa | NA |