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Cluster: HRGMv2_0285_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0285_28 HRGMv2_0285_28_20 23818 25299 + 3.A.1.105.15
NULL(UNKNOWN) HRGMv2_0285_28 HRGMv2_0285_28_21 25296 25526 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0285_28 HRGMv2_0285_28_22 25529 26356 + 3.A.1.105.15
TC HRGMv2_0285_28 HRGMv2_0285_28_23 26419 27501 + 3.A.1.105.15
STP HRGMv2_0285_28 HRGMv2_0285_28_24 27854 28978 + ATPase_2
pfam HRGMv2_0285_28 HRGMv2_0285_28_25 29040 29549 + Hexapep | Hexapep | Hexapep_2
CAZyme HRGMv2_0285_28 HRGMv2_0285_28_26 29806 31542 - GH13_44
CAZyme HRGMv2_0285_28 HRGMv2_0285_28_27 31936 34197 + GH3
CAZyme HRGMv2_0285_28 HRGMv2_0285_28_28 34362 36581 + GH3
Gene ID: HRGMv2_0285_28_20
Type: TC
Location: 23818 - 25299 (+)
Gene ID: HRGMv2_0285_28_21
Type:
Location: 25296 - 25526 (+)
Gene ID: HRGMv2_0285_28_22
Type: TC
Location: 25529 - 26356 (+)
Gene ID: HRGMv2_0285_28_23
Type: TC
Location: 26419 - 27501 (+)
Gene ID: HRGMv2_0285_28_24
Type: STP
Location: 27854 - 28978 (+)
Gene ID: HRGMv2_0285_28_25
Type: pfam
Location: 29040 - 29549 (+)
Gene ID: HRGMv2_0285_28_26
Type: CAZyme
Location: 29806 - 31542 (-)
Gene ID: HRGMv2_0285_28_27
Type: CAZyme
Location: 31936 - 34197 (+)
Gene ID: HRGMv2_0285_28_28
Type: CAZyme
Location: 34362 - 36581 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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