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Cluster: HRGMv2_0285_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0285_33 HRGMv2_0285_33_6 8310 9623 + 2.A.2.6.2
CAZyme HRGMv2_0285_33 HRGMv2_0285_33_7 9754 12429 + CBM20 | GH77
CAZyme HRGMv2_0285_33 HRGMv2_0285_33_8 12507 14645 + GH97
CAZyme HRGMv2_0285_33 HRGMv2_0285_33_9 14827 16839 + GH13_14
CAZyme HRGMv2_0285_33 HRGMv2_0285_33_10 16887 18818 + GH13_46
CAZyme HRGMv2_0285_33 HRGMv2_0285_33_11 18948 20891 - GH51_2
CAZyme HRGMv2_0285_33 HRGMv2_0285_33_12 21090 24332 - GH2
TC HRGMv2_0285_33 HRGMv2_0285_33_13 24558 25436 - 3.A.1.13.2
pfam HRGMv2_0285_33 HRGMv2_0285_33_14 25574 27526 + AAA_11 | AAA_12 | AAA_19 | AAA_30
TC HRGMv2_0285_33 HRGMv2_0285_33_15 27515 29413 - 3.A.3.5.7
Gene ID: HRGMv2_0285_33_6
Type: TC
Location: 8310 - 9623 (+)
Gene ID: HRGMv2_0285_33_7
Type: CAZyme
Location: 9754 - 12429 (+)
Gene ID: HRGMv2_0285_33_8
Type: CAZyme
Location: 12507 - 14645 (+)
Gene ID: HRGMv2_0285_33_9
Type: CAZyme
Location: 14827 - 16839 (+)
Gene ID: HRGMv2_0285_33_10
Type: CAZyme
Location: 16887 - 18818 (+)
Gene ID: HRGMv2_0285_33_11
Type: CAZyme
Location: 18948 - 20891 (-)
Gene ID: HRGMv2_0285_33_12
Type: CAZyme
Location: 21090 - 24332 (-)
Gene ID: HRGMv2_0285_33_13
Type: TC
Location: 24558 - 25436 (-)
Gene ID: HRGMv2_0285_33_14
Type: pfam
Location: 25574 - 27526 (+)
Gene ID: HRGMv2_0285_33_15
Type: TC
Location: 27515 - 29413 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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