y
Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si009562m |
Family | GH51 |
Protein Properties | Length: 663 Molecular Weight: 74075.4 Isoelectric Point: 4.656 |
Chromosome | Chromosome/Scaffold: 7 Start: 34650284 End: 34657867 |
Description | alpha-L-arabinofuranosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH51 | 221 | 534 | 0 |
VIWFDQVSLMPSDTYKGHGFRKELMYMLLDLKPRFLRFPGGCFVEGNLLRNAFRWKETIGPWEERPGHYGDVWNYWTDDGLGYFEFLQLAEDLGAAPIWV FNAGISHNEGVDTNSIAPFVKDVLDSLEFAKGSAESNWGSVRAAMGHRKRFPLKYVAIGNEDCQKEFYQGNYLKFYNAIREAYPDIQMISNCDGSSEALD HPADLYDFHIYNSSTDIFLMKSKFDRTSRTGPKVFVSEYAVTEQKDAGNGSLLASLAEAAFLTGVEKNSDIVQMASYAPLFVNDNDPGWKWNPDAIVFNS WQQYGTPSYWMQTF |
Full Sequence |
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Protein Sequence Length: 663 Download |
MGSKHVYSCN IFFSFLLFSL CCKGVAAELE WTQTATLEVD ASWRLARKIP ETLFGLFFEE 60 INHAGAGGIW EELVSNRGFE AGGPHTPSNI DPWSIIGDES SIYVTTDPVS CFTRNIVALR 120 IEVLCDKCPT GGVGVYNPGF WGMNIEEGKT YNLVMYIRSP ESVELTASLT CSRPSGALQN 180 LASAYIQDID VSNWTRVELK LLAQETCRTS RLDLTTSKRG VIWFDQVSLM PSDTYKGHGF 240 RKELMYMLLD LKPRFLRFPG GCFVEGNLLR NAFRWKETIG PWEERPGHYG DVWNYWTDDG 300 LGYFEFLQLA EDLGAAPIWV FNAGISHNEG VDTNSIAPFV KDVLDSLEFA KGSAESNWGS 360 VRAAMGHRKR FPLKYVAIGN EDCQKEFYQG NYLKFYNAIR EAYPDIQMIS NCDGSSEALD 420 HPADLYDFHI YNSSTDIFLM KSKFDRTSRT GPKVFVSEYA VTEQKDAGNG SLLASLAEAA 480 FLTGVEKNSD IVQMASYAPL FVNDNDPGWK WNPDAIVFNS WQQYGTPSYW MQTFFRESSG 540 AVIHPITIAS SYSDSLAASA ITWRDTENSF LRVKIVNFGP HAVSLTISAQ ELQVGVDTMR 600 SRVTVLTSSN VMDENSFSNP NNVVPVSREL PNAGEEMQAL LAPYSFTSFD LALDQHERVA 660 EM* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam06964 | Alpha-L-AF_C | 5.0e-21 | 483 | 645 | 170 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
COG3534 | AbfA | 4.0e-26 | 239 | 381 | 143 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
smart00813 | Alpha-L-AF_C | 7.0e-34 | 457 | 645 | 200 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. |
Gene Ontology | |
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GO Term | Description |
GO:0046373 | L-arabinose metabolic process |
GO:0046556 | alpha-N-arabinofuranosidase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK21880.1 | 0 | 1 | 662 | 1 | 656 | AF320325_1 arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II [Hordeum vulgare] |
GenBank | EEC67598.1 | 0 | 1 | 662 | 1 | 658 | hypothetical protein OsI_34967 [Oryza sativa Indica Group] |
GenBank | EEC67602.1 | 0 | 33 | 662 | 3 | 628 | hypothetical protein OsI_34972 [Oryza sativa Indica Group] |
RefSeq | NP_001065664.1 | 0 | 1 | 662 | 1 | 657 | Os11g0132600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002442705.1 | 0 | 1 | 662 | 1 | 656 | hypothetical protein SORBIDRAFT_08g001540 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s2c_L | 4e-18 | 239 | 654 | 48 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_K | 4e-18 | 239 | 654 | 48 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_J | 4e-18 | 239 | 654 | 48 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_I | 4e-18 | 239 | 654 | 48 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_H | 4e-18 | 239 | 654 | 48 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |