y
Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os12g03470.5 |
Family | GH51 |
Protein Properties | Length: 503 Molecular Weight: 55922.2 Isoelectric Point: 5.6166 |
Chromosome | Chromosome/Scaffold: 12 Start: 1359586 End: 1366649 |
Description | alpha-L-arabinofuranosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH51 | 182 | 488 | 0 |
LASSTIPVSGASNWTKLEQKLVAKGTNRTSRLQITTTKKGVVWFDQVSLMSADTYKGHGFRTELISMMLDLKPRFLRFPGGCFVEGEWLRNAFRWRESIG PWEERPGHFGDVWHYWTDDGLGYYEFLQLSEDLGAAPIWVFNNGISHNDEVDTAAIAPFVKDVLDSLEFARGSADSTWGSVRAAMGHPEPFPVKYVAIGN EDCGKKFYRGNYLKFYNAIREAYPDIQMISNCDASSRPLDHPADLYDFHVYTDSKTLFSMKSAFDRSSRNGPKAFVSEYAVWRSDAGRGSLLASLAEAAF LTGLEKN |
Full Sequence |
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Protein Sequence Length: 503 Download |
MGSREPFLSA IFFFFFLLLF CLGCKCIASE LHLHTTQTAV LKVDASLQHA RQIPDTLFGI 60 FFEEINHAGA GGIWAELVSN RGFEAGGPHT PSNIDPWSII GDDSSIFVAT DRTSCFSRNT 120 VALRMEVLCD NCPAGGVGIY NPGFWGMNIE DGKTYNLVMY VKSPETVELT VSLTSSDGSQ 180 NLASSTIPVS GASNWTKLEQ KLVAKGTNRT SRLQITTTKK GVVWFDQVSL MSADTYKGHG 240 FRTELISMML DLKPRFLRFP GGCFVEGEWL RNAFRWRESI GPWEERPGHF GDVWHYWTDD 300 GLGYYEFLQL SEDLGAAPIW VFNNGISHND EVDTAAIAPF VKDVLDSLEF ARGSADSTWG 360 SVRAAMGHPE PFPVKYVAIG NEDCGKKFYR GNYLKFYNAI REAYPDIQMI SNCDASSRPL 420 DHPADLYDFH VYTDSKTLFS MKSAFDRSSR NGPKAFVSEY AVWRSDAGRG SLLASLAEAA 480 FLTGLEKNRL SFLETIFSFR VV* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3534 | AbfA | 5.0e-28 | 240 | 387 | 153 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0005576 | extracellular region |
GO:0005618 | cell wall |
GO:0005773 | vacuole |
GO:0005975 | carbohydrate metabolic process |
GO:0008152 | metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABA96372.2 | 0 | 1 | 502 | 1 | 502 | Alpha-L-arabinofuranosidase C-terminus family protein, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EEC68793.1 | 0 | 1 | 488 | 1 | 487 | hypothetical protein OsI_37345 [Oryza sativa Indica Group] |
GenBank | EEE52698.1 | 0 | 1 | 488 | 1 | 488 | hypothetical protein OsJ_35098 [Oryza sativa Japonica Group] |
RefSeq | NP_001065660.1 | 0 | 1 | 488 | 1 | 486 | Os11g0131900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001066062.1 | 0 | 1 | 488 | 1 | 488 | Os12g0128700 [Oryza sativa (japonica cultivar-group)] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s2c_L | 3e-16 | 240 | 463 | 48 | 285 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_K | 3e-16 | 240 | 463 | 48 | 285 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_J | 3e-16 | 240 | 463 | 48 | 285 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_I | 3e-16 | 240 | 463 | 48 | 285 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_H | 3e-16 | 240 | 463 | 48 | 285 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |