y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma19g30450.1 |
Family | GH51 |
Protein Properties | Length: 677 Molecular Weight: 74003.2 Isoelectric Point: 5.0787 |
Chromosome | Chromosome/Scaffold: 19 Start: 38053750 End: 38063991 |
Description | alpha-L-arabinofuranosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH51 | 211 | 660 | 0 |
TDNNSRLQLTTTTKGVIWLDQVSAMPLDTYKGHGFRTDLVEMLTALKPRFIRFPGGCFVEGEWLRNAFRWKTSIGPWEERPGHFGDVWMYWTDDGLGYYE FLQLAEDLGASPIWVFNNGVSHNDQVDTSAVLPLVQEALDGIEFARGDPTSKWGSLRAAMGHPEPFDLRYVAVGNEDCGKKNYRGNYLKFYSAIKSAYPD IQIISNCDGSSRPLDHPADMYDYHVYTNANDMFSRANTFDHTSRNGPKAFVSEYAVTGKDAGTGSLLAALAEAGFLIGLEKNSDVIQMASYAPLFVNAND RRWNPDAIVFNSFQLYGTPSYWVQLFFSESSGATLLSTSLQAPSSNSLVASAITFQNSVDKKNYIRIKVVNFGTTAVNLKISLDGLEPNSLQLSGSTKTV LTSANVMDENSFSQPKKVVPIQSLLQNVEKDMNVTVPPRSFTSFDLLKQS |
Full Sequence |
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Protein Sequence Length: 677 Download |
MGSSKALCSV SLLHLFIVVC LVFQCFATKN HADLTTTLTV NASDASGKPI PETLFGIFFE 60 EINHAGAGGL WAELVSNRGF EAGGPNTPSN IDPWSIIGNE SLINVETDRT SCFDRNKVAL 120 RLEVSCDSEG DNICPADGVG VYNPGFWGMN IEQGKKYKVV FYVRSTESLN LTVSLTGSNG 180 VGNLASSVIT GSALDFSNWT KVEKILVAKA TDNNSRLQLT TTTKGVIWLD QVSAMPLDTY 240 KGHGFRTDLV EMLTALKPRF IRFPGGCFVE GEWLRNAFRW KTSIGPWEER PGHFGDVWMY 300 WTDDGLGYYE FLQLAEDLGA SPIWVFNNGV SHNDQVDTSA VLPLVQEALD GIEFARGDPT 360 SKWGSLRAAM GHPEPFDLRY VAVGNEDCGK KNYRGNYLKF YSAIKSAYPD IQIISNCDGS 420 SRPLDHPADM YDYHVYTNAN DMFSRANTFD HTSRNGPKAF VSEYAVTGKD AGTGSLLAAL 480 AEAGFLIGLE KNSDVIQMAS YAPLFVNAND RRWNPDAIVF NSFQLYGTPS YWVQLFFSES 540 SGATLLSTSL QAPSSNSLVA SAITFQNSVD KKNYIRIKVV NFGTTAVNLK ISLDGLEPNS 600 LQLSGSTKTV LTSANVMDEN SFSQPKKVVP IQSLLQNVEK DMNVTVPPRS FTSFDLLKQS 660 SNLKMAGSDS STWSSI* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3534 | AbfA | 2.0e-42 | 244 | 650 | 482 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
pfam06964 | Alpha-L-AF_C | 2.0e-44 | 462 | 650 | 206 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
smart00813 | Alpha-L-AF_C | 5.0e-54 | 462 | 650 | 199 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. |
Gene Ontology | |
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GO Term | Description |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
GO:0046373 | L-arabinose metabolic process |
GO:0046556 | alpha-N-arabinofuranosidase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP97437.1 | 0 | 20 | 676 | 18 | 675 | alpha-L-arabinofuranosidase [Malus x domestica] |
GenBank | ABV32544.1 | 0 | 20 | 676 | 18 | 677 | alpha-L-arabinofuranosidase protein [Prunus persica] |
DDBJ | BAF42035.1 | 0 | 1 | 676 | 1 | 675 | alpha-Arabinosidase1 [Pyrus communis] |
RefSeq | XP_002307940.1 | 0 | 1 | 676 | 1 | 670 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523672.1 | 0 | 25 | 676 | 29 | 678 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4atw_F | 4e-22 | 244 | 656 | 48 | 481 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
PDB | 4atw_E | 4e-22 | 244 | 656 | 48 | 481 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
PDB | 4atw_D | 4e-22 | 244 | 656 | 48 | 481 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
PDB | 4atw_C | 4e-22 | 244 | 656 | 48 | 481 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
PDB | 4atw_B | 4e-22 | 244 | 656 | 48 | 481 | A Chain A, The Crystal Structure Of Arabinofuranosidase |