y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10011228m |
Family | GH51 |
Protein Properties | Length: 676 Molecular Weight: 74049.6 Isoelectric Point: 5.0921 |
Chromosome | Chromosome/Scaffold: 6 Start: 21635127 End: 21642518 |
Description | alpha-L-arabinofuranosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH51 | 210 | 655 | 0 |
TNPNARLQLTTSRKGVIWFDQVSAMPLDTYKGHGFRNVLFQMLADLKPRFLRFPGGCFVEGEWLRNAFRWKASVGPWENRAGHFGDVWMYWTDDGLGYFE FLQLAEDLGALPIWVFNNGISHTDEVDTSAVLPFVQEALDGIEFARGDANSTWGSVRAAMGHPDPFDLRYVAVGNEDCPKKNYRGNYLKFYDAIKRAYPD IGIISNCDGSSSPLDHKADFYDFHIYTSANDMFSKTHKFDHTSRTGPKAFVSEYAVTGNDAGTGSLLAALAEGGFLIGLEKNSDVVAMASYAPLFVNAND RRWKPDAIVFNSAQLYGTPSYWVQQFFRESSGATLLNATLLTNSSSSIVASAISWEDSENAKSYLRIKVVNLGSSSVNLKVSVDGLGPNSIKLSGSTKTQ LTSTNLKDENSFMEPNKVVPSLTLLENAAKDMDVVISPYSFTSFDL |
Full Sequence |
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Protein Sequence Length: 676 Download |
MAFCKVPSCG VLLLLFFIAT CFLFQCFAAE VEVNQTARLL VDASQGRLIP ETLFGIFFEE 60 INHAGAGGLW AELVSNRGFE AGGQNIPSNI DPWAIIGNDS SLIVSTDRSS CFERNKVALR 120 MEVLCDSQGT NICPVGGVGV YNPGYWGMGI KQGKTYKVVF YIRSLGSVNI SVSLTSSNGL 180 QTLATSNIIA SASDVSNWTR VETLLEAKET NPNARLQLTT SRKGVIWFDQ VSAMPLDTYK 240 GHGFRNVLFQ MLADLKPRFL RFPGGCFVEG EWLRNAFRWK ASVGPWENRA GHFGDVWMYW 300 TDDGLGYFEF LQLAEDLGAL PIWVFNNGIS HTDEVDTSAV LPFVQEALDG IEFARGDANS 360 TWGSVRAAMG HPDPFDLRYV AVGNEDCPKK NYRGNYLKFY DAIKRAYPDI GIISNCDGSS 420 SPLDHKADFY DFHIYTSAND MFSKTHKFDH TSRTGPKAFV SEYAVTGNDA GTGSLLAALA 480 EGGFLIGLEK NSDVVAMASY APLFVNANDR RWKPDAIVFN SAQLYGTPSY WVQQFFRESS 540 GATLLNATLL TNSSSSIVAS AISWEDSENA KSYLRIKVVN LGSSSVNLKV SVDGLGPNSI 600 KLSGSTKTQL TSTNLKDENS FMEPNKVVPS LTLLENAAKD MDVVISPYSF TSFDLLRESV 660 SMKMEGTDSF SRSSI* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 0.006 | 71 | 220 | 153 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3534 | AbfA | 3.0e-30 | 243 | 649 | 481 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
pfam06964 | Alpha-L-AF_C | 5.0e-35 | 461 | 649 | 206 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
smart00813 | Alpha-L-AF_C | 3.0e-42 | 461 | 649 | 199 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. |
Gene Ontology | |
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GO Term | Description |
GO:0046373 | L-arabinose metabolic process |
GO:0046556 | alpha-N-arabinofuranosidase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF22680.3 | 0 | 21 | 675 | 18 | 677 | alpha-L-arabinofuranosidase [Prunus persica] |
GenBank | ABV32544.1 | 0 | 21 | 675 | 18 | 677 | alpha-L-arabinofuranosidase protein [Prunus persica] |
DDBJ | BAF42035.1 | 0 | 1 | 675 | 1 | 675 | alpha-Arabinosidase1 [Pyrus communis] |
RefSeq | XP_002307940.1 | 0 | 1 | 675 | 1 | 670 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523672.1 | 0 | 1 | 675 | 4 | 678 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4atw_F | 7e-16 | 243 | 627 | 48 | 454 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
PDB | 4atw_E | 7e-16 | 243 | 627 | 48 | 454 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
PDB | 4atw_D | 7e-16 | 243 | 627 | 48 | 454 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
PDB | 4atw_C | 7e-16 | 243 | 627 | 48 | 454 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
PDB | 4atw_B | 7e-16 | 243 | 627 | 48 | 454 | A Chain A, The Crystal Structure Of Arabinofuranosidase |