y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10038988 |
Family | GH51 |
Protein Properties | Length: 674 Molecular Weight: 73293.5 Isoelectric Point: 5.2782 |
Chromosome | Chromosome/Scaffold: 34 Start: 1146642 End: 1150584 |
Description | alpha-L-arabinofuranosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH51 | 222 | 652 | 0 |
KGVIWFDQVSLMPEDTYKGHGFRTELFEMLQEIKPRFLRFPGGCFVEGEWLRNAFRWKESVGPWEERPGHFGDVWMYWTDDGLGYYEFLQLAEDLDTLPI WVFNNGISHQDQVDTSSILPFVQEALDGLEFALGDAGSKWGSIRAAMGHPAPFNLKYVAIGNEDCGKKNYRGNYLKFYEAIKRDYPGIQMISNCDGSVNP LDHPAEFYDFHVYTSASNLFSMSHQFDRTSRSGPKAFVSEYAVTGKDAGTGSLLAALAEAAFLIGVEKNSDIVEMASYAPLFVNTNDRRWNPDAIVFNAS KAYGTPSYWMQRFFAESSGSYLLNSTLQTTSSSSLVASAISWQDSKDSSTYIRIKVVNFASSAVNLKISVSGLGLNSVGVSGSTKTVLTSANVMDENSFQ QPNKVAPAQSQLQNAGKDMDVQLSPNSITSF |
Full Sequence |
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Protein Sequence Length: 674 Download |
MAAAASSSYL LCCFIIAAIA VCLVTPSPVD GALDANLTAK LSVDASVRRT IPSTLFGIFF 60 EEINHAGAGG LWAELVSNRG FEAGGANIPS NIDPWTTIGD TSSVIVSTDR SSCFERNKIA 120 LRLDVLCDVK SCPAGGVGVY NPGYWGMNIV KGKKYKLVLY VRSSDAIDVS VSLTGSNGAL 180 TLATTSIKAS ASDVSNWTKV EGLLEAKESD QSARLELRTS TKGVIWFDQV SLMPEDTYKG 240 HGFRTELFEM LQEIKPRFLR FPGGCFVEGE WLRNAFRWKE SVGPWEERPG HFGDVWMYWT 300 DDGLGYYEFL QLAEDLDTLP IWVFNNGISH QDQVDTSSIL PFVQEALDGL EFALGDAGSK 360 WGSIRAAMGH PAPFNLKYVA IGNEDCGKKN YRGNYLKFYE AIKRDYPGIQ MISNCDGSVN 420 PLDHPAEFYD FHVYTSASNL FSMSHQFDRT SRSGPKAFVS EYAVTGKDAG TGSLLAALAE 480 AAFLIGVEKN SDIVEMASYA PLFVNTNDRR WNPDAIVFNA SKAYGTPSYW MQRFFAESSG 540 SYLLNSTLQT TSSSSLVASA ISWQDSKDSS TYIRIKVVNF ASSAVNLKIS VSGLGLNSVG 600 VSGSTKTVLT SANVMDENSF QQPNKVAPAQ SQLQNAGKDM DVQLSPNSIT SFDLLTQSHS 660 IRTRKAGPFA RVS* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam06964 | Alpha-L-AF_C | 2.0e-24 | 460 | 648 | 202 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
COG3534 | AbfA | 2.0e-30 | 242 | 389 | 153 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
smart00813 | Alpha-L-AF_C | 6.0e-32 | 460 | 648 | 199 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. |
Gene Ontology | |
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GO Term | Description |
GO:0046373 | L-arabinose metabolic process |
GO:0046556 | alpha-N-arabinofuranosidase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP97437.1 | 0 | 32 | 666 | 27 | 667 | alpha-L-arabinofuranosidase [Malus x domestica] |
GenBank | ABF22680.3 | 0 | 13 | 666 | 18 | 669 | alpha-L-arabinofuranosidase [Prunus persica] |
GenBank | ABV32544.1 | 0 | 13 | 666 | 18 | 669 | alpha-L-arabinofuranosidase protein [Prunus persica] |
RefSeq | XP_002307940.1 | 0 | 5 | 673 | 6 | 669 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523672.1 | 0 | 33 | 673 | 34 | 677 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ug5_F | 7e-19 | 242 | 626 | 68 | 474 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 3ug5_E | 7e-19 | 242 | 626 | 68 | 474 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 3ug5_D | 7e-19 | 242 | 626 | 68 | 474 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 3ug5_C | 7e-19 | 242 | 626 | 68 | 474 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 3ug5_B | 7e-19 | 242 | 626 | 68 | 474 | A Chain A, Pectin Methylesterase From Carrot |