y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10002522m |
Family | GH51 |
Protein Properties | Length: 678 Molecular Weight: 75530.1 Isoelectric Point: 4.6152 |
Chromosome | Chromosome/Scaffold: 6 Start: 9088639 End: 9092092 |
Description | alpha-L-arabinofuranosidase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH51 | 223 | 660 | 0 |
QFTTTKKGLIWFDQVSAIPMDTYKGHGFRNDLIQMMIDLKPRFLRFPGGCFVEGDWLGNAFRWKETVGAWEERPGHYGDVWKYWTDDGLGHFEFFQLAED IGAAPVWVFNNGISHNDQVETQNVMPFVQEALDGIEFARGDANSTWGSVRAAMGHPEPFELKYVAVGNEDCGMPYYRGNYLEFYDAIKKTYPDIKIISNC DASSQPLDHPADYFDYHIYTLASDLYVRSHDFDNTPRNGPKAFVSEYAVNKTDANTGNLLAALGEAAFLLGLEKNSDVVGMVSYAPLFVNTNDRRWIPDA IVFNSSHLYGTPSYWVQQFFTESSGATLLNSTLMGNSSIVKASAISFQTNGKDYIQIKAVNIGEKSIYLDVAVTRSIAKFYLFKKKVLTSTNVMDENSFS NPEMIVPQESLMEMTEEDDLMFVLPPHSLSSFDLKDSA |
Full Sequence |
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Protein Sequence Length: 678 Download |
MKTSWKFFTS VCILLFLLGS CSVYQNHCLA DAQEDAIVMM TLQLDASNVT RRPIPDTLFG 60 IFFEEINHAG AGGLWAELVS NRGFEAGGQN IPSNIWPWSI IGDESSVYVV TDRSSCFERN 120 KIALKMEVLC DSIGSSNTCP SGGVGVYNPG YWGMNIEEGK KYNVVFFVRS TGDIDLSVSF 180 TSSNGSLTLA SENIKALASE VSNWTRRELI LEANGTDNGA RLQFTTTKKG LIWFDQVSAI 240 PMDTYKGHGF RNDLIQMMID LKPRFLRFPG GCFVEGDWLG NAFRWKETVG AWEERPGHYG 300 DVWKYWTDDG LGHFEFFQLA EDIGAAPVWV FNNGISHNDQ VETQNVMPFV QEALDGIEFA 360 RGDANSTWGS VRAAMGHPEP FELKYVAVGN EDCGMPYYRG NYLEFYDAIK KTYPDIKIIS 420 NCDASSQPLD HPADYFDYHI YTLASDLYVR SHDFDNTPRN GPKAFVSEYA VNKTDANTGN 480 LLAALGEAAF LLGLEKNSDV VGMVSYAPLF VNTNDRRWIP DAIVFNSSHL YGTPSYWVQQ 540 FFTESSGATL LNSTLMGNSS IVKASAISFQ TNGKDYIQIK AVNIGEKSIY LDVAVTRSIA 600 KFYLFKKKVL TSTNVMDENS FSNPEMIVPQ ESLMEMTEED DLMFVLPPHS LSSFDLKDSA 660 NIIKMPLAEP YKKTSTI* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam06964 | Alpha-L-AF_C | 2.0e-29 | 496 | 650 | 164 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
COG3534 | AbfA | 3.0e-33 | 249 | 657 | 487 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
smart00813 | Alpha-L-AF_C | 9.0e-37 | 467 | 650 | 196 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. |
Gene Ontology | |
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GO Term | Description |
GO:0046373 | L-arabinose metabolic process |
GO:0046556 | alpha-N-arabinofuranosidase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD40132.1 | 0 | 126 | 677 | 1 | 521 | AF149413_13 contains similarity to arabinosidase [Arabidopsis thaliana] |
GenBank | AAK50089.1 | 0 | 4 | 677 | 5 | 678 | AF372949_1 AT3g10740/T7M13_18 [Arabidopsis thaliana] |
GenBank | AAO92261.1 | 0 | 4 | 677 | 5 | 678 | alpha-L-arabinofuranosidase [Arabidopsis thaliana] |
RefSeq | NP_187685.1 | 0 | 4 | 677 | 5 | 678 | ASD1 (ALPHA-L-ARABINOFURANOSIDASE 1); alpha-N-arabinofuranosidase/ hydrolase, acting on glycosyl bonds / xylan 1,4-beta-xylosidase [Arabidopsis thaliana] |
RefSeq | NP_197984.2 | 0 | 1 | 677 | 3 | 674 | ASD2 (ALPHA-L-ARABINOFURANOSIDASE 2); alpha-N-arabinofuranosidase/ hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s2c_L | 3e-16 | 248 | 553 | 47 | 364 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_K | 3e-16 | 248 | 553 | 47 | 364 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_J | 3e-16 | 248 | 553 | 47 | 364 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_I | 3e-16 | 248 | 553 | 47 | 364 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_H | 3e-16 | 248 | 553 | 47 | 364 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |