y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G027700.4 |
Family | GH51 |
Protein Properties | Length: 408 Molecular Weight: 45143 Isoelectric Point: 4.72 |
Chromosome | Chromosome/Scaffold: 06 Start: 1856700 End: 1861537 |
Description | alpha-L-arabinofuranosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH51 | 220 | 387 | 0 |
KGVIWFDQVSAMPLETYKGHGFQKELIEMLEDIKPQFIRFPGGCFVEGEWLRNAFRWKESIGPWEERPGHFGDVWMYWTDDGLGYFEFLQLSEDLGARPI WVFNNGISHRDEVDTTTVSPFVQEALDGLEFARGASDSKWGSVRAAMGHPEPFDLKYVAVGNEDCWKK |
Full Sequence |
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Protein Sequence Length: 408 Download |
MGYWKASCSV LLVCFFVGLC SVYQCSAAEV DAYQTAKLIV NASSGRPIPE TLFGIFFEEI 60 NHAGAGGIWA ELVSNRGFEA GGQNTPSNIA PWSIIGDQSS LTVSTDRSSC FERNKVALRM 120 HVLCDSEGSN ICPAGGVGIY NPGFWGMNIE QGKIYKVVLY VRSLGSINVS VSLTSSDGLQ 180 ILATANIVDS DVSNWTKTEV LLEAKGTNPN SRLQLTTSRK GVIWFDQVSA MPLETYKGHG 240 FQKELIEMLE DIKPQFIRFP GGCFVEGEWL RNAFRWKESI GPWEERPGHF GDVWMYWTDD 300 GLGYFEFLQL SEDLGARPIW VFNNGISHRD EVDTTTVSPF VQEALDGLEF ARGASDSKWG 360 SVRAAMGHPE PFDLKYVAVG NEDCWKKNYR GLCTQEHAWI TNSDMPI* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3534 | AbfA | 3.0e-29 | 240 | 382 | 143 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF22680.3 | 0 | 20 | 391 | 18 | 393 | alpha-L-arabinofuranosidase [Prunus persica] |
GenBank | ABV32544.1 | 0 | 20 | 391 | 18 | 393 | alpha-L-arabinofuranosidase protein [Prunus persica] |
RefSeq | XP_002307940.1 | 0 | 1 | 391 | 1 | 391 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322584.1 | 0 | 1 | 391 | 5 | 395 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523672.1 | 0 | 25 | 391 | 29 | 397 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4atw_F | 2e-16 | 240 | 382 | 48 | 172 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
PDB | 4atw_E | 2e-16 | 240 | 382 | 48 | 172 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
PDB | 4atw_D | 2e-16 | 240 | 382 | 48 | 172 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
PDB | 4atw_C | 2e-16 | 240 | 382 | 48 | 172 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
PDB | 4atw_B | 2e-16 | 240 | 382 | 48 | 172 | A Chain A, The Crystal Structure Of Arabinofuranosidase |