y
Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00062244m |
Family | GT31 |
Protein Properties | Length: 390 Molecular Weight: 43532.8 Isoelectric Point: 8.1834 |
Chromosome | Chromosome/Scaffold: 001021 Start: 18631 End: 22999 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT31 | 143 | 336 | 1.54143e-44 |
KRNTFRGSWMPRGDALKKLEEKGVVIRFVIGRSANRGDTLDRNIDDENRRTNDFLILESHEEAAEELPSKAKIFFSAAVEAWDAEFYVKVEDNINLDLAG LIEMLEGRRGNQGLYMGCMKSGVVVSEEGQQWYEPEWWKFGDSKTYFRHASGSLFILSNNLARYININSASLQSYAHDDISVGSWMMGVNATYV |
Full Sequence |
---|
Protein Sequence Length: 390 Download |
METLASAMRR ENRRFKAPSA GAASAGAGVA SGRVPLVMAF LSCLAWLYVA GRLWQDAQTR 60 AILSGLLEKN SGNLPKVLSV EDKLRNLGCK EIGRKIVEAE MDLTKAKSEG YLWGNRTAAV 120 DSEKKQQLLA VIGVYTGFGS RLKRNTFRGS WMPRGDALKK LEEKGVVIRF VIGRSANRGD 180 TLDRNIDDEN RRTNDFLILE SHEEAAEELP SKAKIFFSAA VEAWDAEFYV KVEDNINLDL 240 AGLIEMLEGR RGNQGLYMGC MKSGVVVSEE GQQWYEPEWW KFGDSKTYFR HASGSLFILS 300 NNLARYININ SASLQSYAHD DISVGSWMMG VNATYVDDDQ LCCGSSRQGR SCFLTKTTYQ 360 LWAVPRNLFL LMLCFLTIIP RESMFQCLS* 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam13334 | DUF4094 | 3.0e-11 | 33 | 109 | 89 | + Domain of unknown function (DUF4094). This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. | ||
pfam01762 | Galactosyl_T | 9.0e-30 | 144 | 339 | 202 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03193 | PLN03193 | 6.0e-79 | 94 | 345 | 260 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAD44838.2 | 0 | 44 | 373 | 1 | 328 | beta 1,3-glycosyltransferase-like protein II [Oryza sativa] |
RefSeq | NP_001056954.1 | 0 | 1 | 352 | 1 | 351 | Os06g0176200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001149924.1 | 0 | 1 | 352 | 1 | 350 | transferase, transferring glycosyl groups [Zea mays] |
RefSeq | XP_002285482.1 | 0 | 36 | 352 | 20 | 336 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002436587.1 | 0 | 1 | 352 | 1 | 350 | hypothetical protein SORBIDRAFT_10g005160 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
GT047568 | 334 | 1 | 334 | 0 |
GO843749 | 301 | 1 | 301 | 0 |
JG945653 | 261 | 102 | 362 | 0 |
HS385920 | 258 | 95 | 352 | 0 |
GO843749 | 18 | 301 | 318 | 3.4 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|