y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00039040m |
Family | GT31 |
Protein Properties | Length: 398 Molecular Weight: 45038 Isoelectric Point: 7.5559 |
Chromosome | Chromosome/Scaffold: 053905 Start: 675 End: 5069 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 142 | 338 | 0 |
KRRDSVRETWMPQGEKLQQLEEQKGIVIRFTIGHSATSNSILDKAIDSEDAQHHDFLRLDHVEGYHELSAKTKIFFSTAVDFWDADFYVKVDDDVHVNLG MLATTLARHKSKPRTYIGCMKSGPVLADKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKYANEDVSLGSWFIGLEVNHID |
Full Sequence |
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Protein Sequence Length: 398 Download |
MKGKSGAMDR RSSTRWRMLV LCAFSFGLGM LFTDRFWTAP DTNNHIMSQR RRQDQELQLV 60 SEDCNTKRRG EDKDIMGEVT KTHEAIQSLD KSISTLQMEL AAKRSTLELL RSSGSPVTSE 120 TSQPRKKAFV VIGVNTAFSS RKRRDSVRET WMPQGEKLQQ LEEQKGIVIR FTIGHSATSN 180 SILDKAIDSE DAQHHDFLRL DHVEGYHELS AKTKIFFSTA VDFWDADFYV KVDDDVHVNL 240 GMLATTLARH KSKPRTYIGC MKSGPVLADK NVKYHEPEYW KFGEEGNKYF RHATGQIYAI 300 SKDLATYISI NQPILHKYAN EDVSLGSWFI GLEVNHIDER NMCCGTPPDC EWKGQAGNIC 360 VASFDWSCSG ICKSVERIKD VHARCGEGDS AVWSFLI* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03133 | PLN03133 | 8.0e-6 | 107 | 342 | 248 | + beta-1,3-galactosyltransferase; Provisional | ||
pfam13334 | DUF4094 | 1.0e-36 | 13 | 106 | 95 | + Domain of unknown function (DUF4094). This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. | ||
pfam01762 | Galactosyl_T | 4.0e-52 | 142 | 338 | 203 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03193 | PLN03193 | 0 | 13 | 394 | 392 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF79671.1 | 0 | 1 | 397 | 1 | 398 | unknown [Zea mays] |
GenBank | ACG41551.1 | 0 | 1 | 397 | 1 | 398 | avr9 elicitor response protein [Zea mays] |
GenBank | ACN34486.1 | 0 | 1 | 397 | 1 | 398 | unknown [Zea mays] |
DDBJ | BAD17751.1 | 0 | 1 | 397 | 3 | 400 | putative avr9 elicitor response protein [Oryza sativa Japonica Group] |
RefSeq | XP_002454032.1 | 0 | 1 | 397 | 1 | 398 | hypothetical protein SORBIDRAFT_04g023470 [Sorghum bicolor] |