y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00011841m |
Family | GT31 |
Protein Properties | Length: 285 Molecular Weight: 32156.6 Isoelectric Point: 8.5419 |
Chromosome | Chromosome/Scaffold: 084061 Start: 2 End: 2805 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 29 | 225 | 0 |
KRRDSVRATWMPQGEKRRKMEEEKGIIIRFVIGHSATSGGILDRAIDAEDRKHGDFMRLDHVEGYLELAAKTKAYFVAAVSMWDAEYYIKVDDDVHVNIA TLGNTLARHRSKPRVYVGCMKSGPVLAQKGVRYHEPEYWKFGEWGNKYFRHATGQLYAISKDLASYIALNQHVLHKYANEDVSLGAWFIGLDVEHVD |
Full Sequence |
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Protein Sequence Length: 285 Download |
LSVAPASESI GKRKYFMVIG INTAFSSRKR RDSVRATWMP QGEKRRKMEE EKGIIIRFVI 60 GHSATSGGIL DRAIDAEDRK HGDFMRLDHV EGYLELAAKT KAYFVAAVSM WDAEYYIKVD 120 DDVHVNIATL GNTLARHRSK PRVYVGCMKS GPVLAQKGVR YHEPEYWKFG EWGNKYFRHA 180 TGQLYAISKD LASYIALNQH VLHKYANEDV SLGAWFIGLD VEHVDDRRLC CGTPPDCEWK 240 AQAGNVCVAS FDWSCSGICK SADRIKEVHQ RCGESENAIW NAKF* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03133 | PLN03133 | 1.0e-5 | 12 | 229 | 227 | + beta-1,3-galactosyltransferase; Provisional | ||
pfam01762 | Galactosyl_T | 1.0e-57 | 29 | 227 | 205 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03193 | PLN03193 | 0 | 5 | 284 | 280 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN63417.1 | 0 | 5 | 284 | 94 | 373 | hypothetical protein [Vitis vinifera] |
EMBL | CBI26647.1 | 0 | 5 | 284 | 126 | 405 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001050543.1 | 0 | 1 | 284 | 123 | 406 | Os03g0577500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001141034.1 | 0 | 4 | 284 | 81 | 361 | hypothetical protein LOC100273113 [Zea mays] |
RefSeq | XP_002464309.1 | 0 | 1 | 284 | 126 | 409 | hypothetical protein SORBIDRAFT_01g015960 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX278792 | 291 | 1 | 285 | 0 |
EL354006 | 264 | 22 | 285 | 0 |
DV466552 | 280 | 1 | 274 | 0 |
EX266724 | 274 | 1 | 274 | 0 |
EE089898 | 251 | 31 | 281 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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