y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00051384m |
Family | GT31 |
Protein Properties | Length: 297 Molecular Weight: 33428.9 Isoelectric Point: 7.153 |
Chromosome | Chromosome/Scaffold: 023559 Start: 99 End: 2604 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 41 | 237 | 0 |
KRRDSVRETWMPQGEKLKKLEEEKGIILRFTIGHSATSNNVLDKAIDAEDEIHHDFLRLDHVEGYHKLSAKTKIFFSTAVALWDADFYVKVDDDVHLNLG MLVATLGRHKLKPRVYIGCMKSGPVLSDKNAKYHEPEFWKFGEDGNKYFRHATGQIYAISKDLATYISINQPILHKYANEDVSLGAWFIGLDVEHID |
Full Sequence |
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Protein Sequence Length: 297 Download |
MELAAKRSSN ELHGESAGGI SKQRKRAFVV IGINTAFSSR KRRDSVRETW MPQGEKLKKL 60 EEEKGIILRF TIGHSATSNN VLDKAIDAED EIHHDFLRLD HVEGYHKLSA KTKIFFSTAV 120 ALWDADFYVK VDDDVHLNLG MLVATLGRHK LKPRVYIGCM KSGPVLSDKN AKYHEPEFWK 180 FGEDGNKYFR HATGQIYAIS KDLATYISIN QPILHKYANE DVSLGAWFIG LDVEHIDDRD 240 MCCGTPPDCE WKAQAGNVCV ASFDWKCSGV CNPVERLKYV HSRCSEGEDA IWSASF* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03133 | PLN03133 | 1.0e-5 | 24 | 238 | 227 | + beta-1,3-galactosyltransferase; Provisional | ||
pfam01762 | Galactosyl_T | 1.0e-52 | 41 | 239 | 205 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03193 | PLN03193 | 1.0e-176 | 1 | 296 | 303 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF79671.1 | 0 | 1 | 296 | 99 | 398 | unknown [Zea mays] |
RefSeq | NP_001063339.1 | 0 | 1 | 296 | 99 | 393 | Os09g0452900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001131318.1 | 0 | 1 | 296 | 99 | 398 | hypothetical protein LOC100192632 [Zea mays] |
RefSeq | NP_001141890.1 | 0 | 1 | 296 | 103 | 398 | hypothetical protein LOC100274035 [Zea mays] |
RefSeq | XP_002462477.1 | 0 | 1 | 296 | 116 | 410 | hypothetical protein SORBIDRAFT_02g026360 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG876239 | 259 | 39 | 297 | 0 |
GO871487 | 297 | 1 | 294 | 0 |
JK592865 | 246 | 39 | 284 | 0 |
CK268505 | 274 | 24 | 297 | 0 |
HS560505 | 258 | 24 | 281 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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