y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00030978m |
Family | GT31 |
Protein Properties | Length: 386 Molecular Weight: 43415.3 Isoelectric Point: 7.88 |
Chromosome | Chromosome/Scaffold: 007570 Start: 8864 End: 12224 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 129 | 326 | 0 |
KRRDSIRQTWMPQGDQLRRLEEKGAVIRFVIGRSENPNPDNDLDRAIDAEDKEYNDILRLNHVEGYGGLPMKIQMFLSTALTTWDADFYVKVDDNVHVNI GITRLILARHRMKPRVYIGCMKSGPVVAKNDSKYYEPDHWKFGTEGNNYFRHATRQLYAVTRDLATYISANRHILHKYSNEDVSFGSWLIGLEVEHVD |
Full Sequence |
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Protein Sequence Length: 386 Download |
MMAAAALRPH KAPPARVPTR WVAALCAACF LLGVCVVNRY WPVPEHPGCP DKASSDHSRA 60 ALNQVSQTRE VIMALDKTIS DIEMRLAAAR AAQAMSQGMS PSDSEGDQGS MRHRMSFVMG 120 VFTTFANRKR RDSIRQTWMP QGDQLRRLEE KGAVIRFVIG RSENPNPDND LDRAIDAEDK 180 EYNDILRLNH VEGYGGLPMK IQMFLSTALT TWDADFYVKV DDNVHVNIGI TRLILARHRM 240 KPRVYIGCMK SGPVVAKNDS KYYEPDHWKF GTEGNNYFRH ATRQLYAVTR DLATYISANR 300 HILHKYSNED VSFGSWLIGL EVEHVDERSL CCGTPPDCEW KAQAGNPCAA SFDWNCTGIC 360 NPVERMAEVH RRCWEGRGAE GHAQF* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03133 | PLN03133 | 7.0e-10 | 110 | 327 | 232 | + beta-1,3-galactosyltransferase; Provisional | ||
pfam13334 | DUF4094 | 1.0e-23 | 18 | 86 | 83 | + Domain of unknown function (DUF4094). This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. | ||
pfam01762 | Galactosyl_T | 6.0e-47 | 129 | 326 | 204 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03193 | PLN03193 | 3.0e-158 | 13 | 385 | 401 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF85316.1 | 0 | 1 | 384 | 1 | 387 | unknown [Zea mays] |
GenBank | ACN27226.1 | 0 | 73 | 384 | 1 | 344 | unknown [Zea mays] |
GenBank | EEE67938.1 | 0 | 4 | 385 | 5 | 388 | hypothetical protein OsJ_25826 [Oryza sativa Japonica Group] |
RefSeq | NP_001060857.1 | 0 | 4 | 385 | 5 | 388 | Os08g0116900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002444929.1 | 0 | 1 | 385 | 1 | 385 | hypothetical protein SORBIDRAFT_07g001590 [Sorghum bicolor] |