y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000208103 |
Family | GT31 |
Protein Properties | Length: 601 Molecular Weight: 68330.7 Isoelectric Point: 9.412 |
Chromosome | Chromosome/Scaffold: 016906196 Start: 1888 End: 7755 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 344 | 540 | 0 |
KRRDSVRATWMPQGEDRKKLEEEKGIIIRFVIGHSSTAGGILDKAVEAEERVHGDFLXLDHVEGYLELSAKTKTYFSTAVALWDAEFYIKVDDDVHVNLA TLGMILSRHRLKPRVYIGCMKSGPVLARKGVKYHEPEFWKFGEIGNKYFRHATGQLYAISKDLATYISINQDVLHKYANEDVSLGSWFIGLDVEQVD |
Full Sequence |
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Protein Sequence Length: 601 Download |
MTKTYKLCYR MTNNLELIGY SDSDFAGCAD SLKSTSSYVF ILVGGAVSWK SAKQGEVATS 60 TMQAEYVACY EATSQAVWLK NFISSMNVVE SIARPIQLWC DNKAAVFHAR NNKRSNGTRY 120 LDLKYKMIRK EVKKQQIKID YIDTKSMLAD PLNKALPNAA FHVHVKNMGY QVKGVPNPDW 180 LRRYRHIQLP IRSLRLLKYA IFTNSPYSLI AKDQYNVEDS LHTKVSRMAS PAXPEGNVCE 240 EQRMGRRASV LEFYLPTGYG XCPXQGHREL ELKRYSPNLM LLIISLQLNK TISDLEXKLA 300 AARATHESVH NGYPTSGNLK TVQSXSKKKY FMFIGINTAF NSRKRRDSVR ATWMPQGEDR 360 KKLEEEKGII IRFVIGHSST AGGILDKAVE AEERVHGDFL XLDHVEGYLE LSAKTKTYFS 420 TAVALWDAEF YIKVDDDVHV NLATLGMILS RHRLKPRVYI GCMKSGPVLA RKGVKYHEPE 480 FWKFGEIGNK YFRHATGQLY AISKDLATYI SINQDVLHKY ANEDVSLGSW FIGLDVEQVD 540 DRRLCCGTTP DCMWKKMAGN TCAASFDWRC SGICKSIERM MGIHEHCGED KNAXWSARFS 600 Q 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03133 | PLN03133 | 2.0e-9 | 309 | 544 | 261 | + beta-1,3-galactosyltransferase; Provisional | ||
cd09272 | RNase_HI_RT_Ty1 | 9.0e-51 | 18 | 161 | 144 | + Ty1/Copia family of RNase HI in long-term repeat retroelements. Ribonuclease H (RNase H) enzymes are divided into two major families, Type 1 and Type 2, based on amino acid sequence similarities and biochemical properties. RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner in the presence of divalent cations. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes. RNase HI has also been observed as adjunct domains to the reverse transcriptase gene in retroviruses, in long-term repeat (LTR)-bearing and non-LTR retrotransposons. RNase HI in LTR retrotransposons perform degradation of the original RNA template, generation of a polypurine tract (the primer for plus-strand DNA synthesis), and final removal of RNA primers from newly synthesized minus and plus strands. The catalytic residues for RNase H enzymatic activity, three aspartatic acids and one glutamatic acid residue (DEDD) are unvaried across all RNase H domains. Phylogenetic patterns of RNase HI of LTR retroelements is classified into five major families, Ty3/Gypsy, Ty1/Copia, Bel/Pao, DIRS1 and the vertebrate retroviruses. Ty1/Copia family is widely distributed among the genomes of plants, fungi and animals. RNase H inhibitors have been explored as an anti-HIV drug target because RNase H inactivation inhibits reverse transcription. | ||
pfam01762 | Galactosyl_T | 2.0e-54 | 344 | 542 | 205 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03193 | PLN03193 | 0 | 288 | 599 | 312 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI23239.1 | 0 | 288 | 599 | 97 | 408 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001077462.1 | 0 | 284 | 599 | 91 | 407 | galactosyltransferase family protein [Arabidopsis thaliana] |
RefSeq | NP_172009.1 | 0 | 284 | 599 | 88 | 404 | galactosyltransferase family protein [Arabidopsis thaliana] |
RefSeq | XP_002316532.1 | 0 | 288 | 599 | 111 | 414 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002464309.1 | 0 | 288 | 599 | 104 | 409 | hypothetical protein SORBIDRAFT_01g015960 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX278792 | 300 | 300 | 599 | 0 |
EX137442 | 283 | 288 | 570 | 0 |
DV466552 | 298 | 292 | 589 | 0 |
CF652213 | 297 | 288 | 584 | 0 |
EL354006 | 263 | 337 | 599 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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