y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00004705m |
Family | GT31 |
Protein Properties | Length: 157 Molecular Weight: 17532.1 Isoelectric Point: 8.3995 |
Chromosome | Chromosome/Scaffold: 0183083 Start: 1054 End: 2349 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 2 | 97 | 1.4e-24 |
LSSRLAKHRTRPRVYVGCMKSGPVLSQKGVKYHEPEYWKFGDEGNKYFRHATGQIYAISKDLAAYISINQPILHRFANEDVSLGAWLIGLEVEHVD |
Full Sequence |
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Protein Sequence Length: 157 Download |
MLSSRLAKHR TRPRVYVGCM KSGPVLSQKG VKYHEPEYWK FGDEGNKYFR HATGQIYAIS 60 KDLAAYISIN QPILHRFANE DVSLGAWLIG LEVEHVDDRS MCCATPPDCE WKKRAGNVCV 120 ASFDWSCSGV CKSVDRMRHI HKACGEGEGA VWNVAI* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01762 | Galactosyl_T | 4.0e-20 | 5 | 99 | 97 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03193 | PLN03193 | 7.0e-99 | 2 | 153 | 152 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACL53751.1 | 0 | 1 | 155 | 257 | 411 | unknown [Zea mays] |
GenBank | EAZ14356.1 | 0 | 1 | 155 | 168 | 322 | hypothetical protein OsJ_04276 [Oryza sativa Japonica Group] |
GenBank | EEC79262.1 | 0 | 1 | 153 | 251 | 403 | hypothetical protein OsI_20042 [Oryza sativa Indica Group] |
RefSeq | NP_001044974.1 | 0 | 1 | 155 | 253 | 407 | Os01g0877400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001149873.1 | 0 | 1 | 155 | 260 | 414 | beta-1,3-galactosyltransferase sqv-2 [Zea mays] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL809510 | 157 | 1 | 157 | 0 |
FL801431 | 157 | 1 | 157 | 0 |
FL747041 | 157 | 1 | 157 | 0 |
FL803640 | 157 | 1 | 157 | 0 |
FL764205 | 157 | 1 | 157 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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