y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00055546m |
Family | GT31 |
Protein Properties | Length: 367 Molecular Weight: 41318.9 Isoelectric Point: 7.2062 |
Chromosome | Chromosome/Scaffold: 074956 Start: 527 End: 3627 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 111 | 307 | 0 |
KRRDSIRNTWMPQGEMRKKLEEEKGIIIRFVIGHSAISGGIVDRAIEAEDKKHGDFMRLDHVEGYLELSGKTRTYFATAVALWDADFYVKVDDDVHVNIA MLGNILSKHILKPRVYIGCMKSGPVLSDKDVRYYEPEHWKFGEVGNKYFRHATGQLYAISKDLATYISINKHVLHKYINEDVSLGSWLIGLDVEHID |
Full Sequence |
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Protein Sequence Length: 367 Download |
MWTLPEASEV AVPNERRGKE SELKAGDCSI RKVQGKHDYS DMLHISDTHH NAQTLDKTIA 60 NLETELSAAR TLQDSFLNGS PVSEEYKASE STVRRKYLMV IGINTAFSSR KRRDSIRNTW 120 MPQGEMRKKL EEEKGIIIRF VIGHSAISGG IVDRAIEAED KKHGDFMRLD HVEGYLELSG 180 KTRTYFATAV ALWDADFYVK VDDDVHVNIA MLGNILSKHI LKPRVYIGCM KSGPVLSDKD 240 VRYYEPEHWK FGEVGNKYFR HATGQLYAIS KDLATYISIN KHVLHKYINE DVSLGSWLIG 300 LDVEHIDDRR LCCGTPPDCE WKAQAGNTCA ASFDWKCSGI CNSVQNIWGV HKKCSEGEKA 360 LLTASF* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03133 | PLN03133 | 1.0e-6 | 79 | 311 | 258 | + beta-1,3-galactosyltransferase; Provisional | ||
pfam13334 | DUF4094 | 1.0e-15 | 1 | 71 | 71 | + Domain of unknown function (DUF4094). This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. | ||
pfam01762 | Galactosyl_T | 1.0e-57 | 111 | 309 | 205 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03193 | PLN03193 | 0 | 1 | 366 | 370 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG42389.1 | 0 | 1 | 336 | 35 | 370 | beta-1,3-galactosyltransferase sqv-2 [Zea mays] |
RefSeq | NP_001058369.1 | 0 | 1 | 366 | 33 | 395 | Os06g0679500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001136834.1 | 0 | 1 | 366 | 35 | 401 | hypothetical protein LOC100216983 [Zea mays] |
RefSeq | NP_001149120.1 | 0 | 1 | 366 | 1 | 366 | beta-1,3-galactosyltransferase sqv-2 [Zea mays] |
RefSeq | XP_002437448.1 | 0 | 1 | 366 | 35 | 400 | hypothetical protein SORBIDRAFT_10g027290 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO867423 | 328 | 1 | 328 | 0 |
JG924245 | 274 | 18 | 291 | 0 |
JG936122 | 284 | 57 | 340 | 0 |
GO874446 | 308 | 60 | 367 | 0 |
EX278792 | 301 | 67 | 367 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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