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Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00017056m |
Family | GT31 |
Protein Properties | Length: 353 Molecular Weight: 39268.7 Isoelectric Point: 8.3373 |
Chromosome | Chromosome/Scaffold: 061241 Start: 173 End: 4140 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 140 | 333 | 9.80909e-45 |
KRNTFRGSWMPRGDALKKLEEKGVVIRFVIGRSANRGDTLDRNIDDENRRTKDFLILVSHEEAAEELPSKAKFFFSAAVEAWDAEFYVKVEDNINLDLAG LIEMLEGRRGNQGLYMGCMKSGVVVSEEGQQWYEPEWWKFGDSKTYFRHASGSLFILSNNLARYININSASLQSYAHDDISVGSWMMGVNATYV |
Full Sequence |
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Protein Sequence Length: 353 Download |
METLASAMRR ENRRLKAPSS SAGAGVASGR VPLVMAFLSC LAWLYVAGRL WQDAQTRAIL 60 SGLLEKNSGN LPKVLSVEDK LRNLGCKEIG RKIVEAEMDL TKAKSEGYLW GNRTAAVDSE 120 KKQQLLAVIG VYTGFGSRLK RNTFRGSWMP RGDALKKLEE KGVVIRFVIG RSANRGDTLD 180 RNIDDENRRT KDFLILVSHE EAAEELPSKA KFFFSAAVEA WDAEFYVKVE DNINLDLAGL 240 IEMLEGRRGN QGLYMGCMKS GVVVSEEGQQ WYEPEWWKFG DSKTYFRHAS GSLFILSNNL 300 ARYININSAS LQSYAHDDIS VGSWMMGVNA TYVDDDRLCC GSSRQEKVCS NA* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam13334 | DUF4094 | 2.0e-11 | 30 | 106 | 89 | + Domain of unknown function (DUF4094). This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. | ||
pfam01762 | Galactosyl_T | 6.0e-31 | 141 | 336 | 202 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03193 | PLN03193 | 6.0e-78 | 91 | 342 | 260 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAD44838.2 | 0 | 41 | 347 | 1 | 306 | beta 1,3-glycosyltransferase-like protein II [Oryza sativa] |
RefSeq | NP_001056954.1 | 0 | 1 | 352 | 1 | 354 | Os06g0176200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001149924.1 | 0 | 1 | 352 | 1 | 353 | transferase, transferring glycosyl groups [Zea mays] |
RefSeq | XP_002285482.1 | 0 | 33 | 352 | 20 | 339 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002436587.1 | 0 | 1 | 352 | 1 | 353 | hypothetical protein SORBIDRAFT_10g005160 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GT047568 | 331 | 1 | 331 | 0 |
JG945653 | 255 | 99 | 353 | 0 |
GO843749 | 298 | 1 | 298 | 0 |
HS385920 | 262 | 92 | 353 | 0 |
GO843749 | 18 | 298 | 315 | 2.7 |
Sequence Alignments (This image is cropped. Click for full image.) |
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