Genome Details
Selected Rep_genome_ID: ShaoY_2019_ERR3405052_bin.2
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| ShaoY_2019_ERR3405052_bin.2 | 2,062,528 | 100% | 0.374% | UK | Europe | ELGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| PUL0519_ShaoY_2019_ERR3405052_bin.2_C7 | CGCFAM_00010 | Yes | 6 | 2 | alpha-glucan |
| ShaoY_2019_ERR3405052_bin.2_CGC12 | CGCFAM_00160 | Yes | 4 | 2 | alpha-glucan |
| ShaoY_2019_ERR3405052_bin.2_CGC13 | CGCFAM_00311 | Yes | 8 | 4 | host glycan |
| ShaoY_2019_ERR3405052_bin.2_CGC4 | CGCFAM_00401 | Yes | 7 | 1 | |
| ShaoY_2019_ERR3405052_bin.2_CGC9 | CGCFAM_00402 | Yes | 20 | 5 | |
| ShaoY_2019_ERR3405052_bin.2_CGC1 | CGCFAM_00638 | Yes | 4 | 1 | |
| ShaoY_2019_ERR3405052_bin.2_CGC7 | CGCFAM_00999 | Yes | 4 | 1 | |
| ShaoY_2019_ERR3405052_bin.2_CGC8 | CGCFAM_04217 | Yes | 4 | 1 | |
| ShaoY_2019_ERR3405052_bin.2_CGC19 | CGCFAM_05796 | Yes | 11 | 2 | |
| ShaoY_2019_ERR3405052_bin.2_CGC3 | CGCFAM_06883 | Yes | 6 | 1 |
Top CAZyme Families