Cluster: ShaoY_2019_ERR3405052_bin.2_CGC19
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405052_bin.2
- CGC Family ID: CGCFAM_05796
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405052_bin.2_k141_602 | ShaoY_2019_ERR3405052_bin.2_k141_602_17 | 13922 | 14623 | - | 9.B.2.1.16 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405052_bin.2_k141_602 | ShaoY_2019_ERR3405052_bin.2_k141_602_18 | 14675 | 14839 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3405052_bin.2_k141_602 | ShaoY_2019_ERR3405052_bin.2_k141_602_19 | 15976 | 24480 | - | CBM32 | GH20 | GH84 |
| CAZyme | ShaoY_2019_ERR3405052_bin.2_k141_602 | ShaoY_2019_ERR3405052_bin.2_k141_602_20 | 24637 | 31665 | - | GH101 |
| TC | ShaoY_2019_ERR3405052_bin.2_k141_602 | ShaoY_2019_ERR3405052_bin.2_k141_602_21 | 31996 | 34326 | - | 3.A.12.1.1 |
| pfam | ShaoY_2019_ERR3405052_bin.2_k141_602 | ShaoY_2019_ERR3405052_bin.2_k141_602_22 | 34416 | 37964 | - | YobI-ATPase |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405052_bin.2_k141_602 | ShaoY_2019_ERR3405052_bin.2_k141_602_23 | 38014 | 38181 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405052_bin.2_k141_602 | ShaoY_2019_ERR3405052_bin.2_k141_602_24 | 38451 | 40406 | - | 4.A.2.1.20 |
| STP | ShaoY_2019_ERR3405052_bin.2_k141_602 | ShaoY_2019_ERR3405052_bin.2_k141_602_25 | 40403 | 41314 | - | PfkB |
| TF | ShaoY_2019_ERR3405052_bin.2_k141_602 | ShaoY_2019_ERR3405052_bin.2_k141_602_26 | 41311 | 42051 | - | HTH_DeoR |
| TC | ShaoY_2019_ERR3405052_bin.2_k141_602 | ShaoY_2019_ERR3405052_bin.2_k141_602_27 | 42537 | 43871 | - | 2.A.55.2.6 |
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_602_17
Type: TC
Location: 13922 - 14623 (-)
Type: TC
Location: 13922 - 14623 (-)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_602_18
Type:
Location: 14675 - 14839 (-)
Type:
Location: 14675 - 14839 (-)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_602_19
Type: CAZyme
Location: 15976 - 24480 (-)
Type: CAZyme
Location: 15976 - 24480 (-)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_602_20
Type: CAZyme
Location: 24637 - 31665 (-)
Type: CAZyme
Location: 24637 - 31665 (-)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_602_21
Type: TC
Location: 31996 - 34326 (-)
Type: TC
Location: 31996 - 34326 (-)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_602_22
Type: pfam
Location: 34416 - 37964 (-)
Type: pfam
Location: 34416 - 37964 (-)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_602_23
Type:
Location: 38014 - 38181 (-)
Type:
Location: 38014 - 38181 (-)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_602_24
Type: TC
Location: 38451 - 40406 (-)
Type: TC
Location: 38451 - 40406 (-)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_602_25
Type: STP
Location: 40403 - 41314 (-)
Type: STP
Location: 40403 - 41314 (-)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_602_26
Type: TF
Location: 41311 - 42051 (-)
Type: TF
Location: 41311 - 42051 (-)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_602_27
Type: TC
Location: 42537 - 43871 (-)
Type: TC
Location: 42537 - 43871 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.