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Cluster: ShaoY_2019_ERR3405052_bin.2_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_10 13885 15495 + GH13_31
TC ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_11 15663 16850 + 3.A.1.5.22
NULL(UNKNOWN) ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_12 16863 17630 + NULL(UNKNOWN)
[View Structural Homologs]
TC ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_13 17896 19854 + 3.A.1.5.25
pfam ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_14 20117 21562 + DNA_PPF | LytR_cpsA_psr
pfam ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_15 21564 22295 + CpsB_CapC
TC ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_16 22304 22996 + 8.A.3.2.3
TC ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_17 23007 23681 + 8.A.3.2.2
TC ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_18 23703 25073 + 9.B.18.1.2
pfam ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_19 25078 25863 + LicD
CAZyme ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_20 25841 26605 + GT26
CAZyme ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_21 26580 27665 + GT4
pfam ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_22 27662 28750 + Epimerase_2
CAZyme ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_23 28756 29721 + GT2
NULL(UNKNOWN) ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_24 29742 30893 + NULL(UNKNOWN)
[View Structural Homologs]
TC ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_25 31082 32497 + 2.A.66.2.16
TC ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_26 32499 33497 + 9.B.97.1.1
STP ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_27 33510 34610 + Pyr_redox
pfam ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_28 34607 35599 + Stealth_CR2 | Stealth_CR1
CAZyme ShaoY_2019_ERR3405052_bin.2_k141_377 ShaoY_2019_ERR3405052_bin.2_k141_377_29 35609 36664 + GT113
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_10
Type: CAZyme
Location: 13885 - 15495 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_11
Type: TC
Location: 15663 - 16850 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_12
Type:
Location: 16863 - 17630 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_13
Type: TC
Location: 17896 - 19854 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_14
Type: pfam
Location: 20117 - 21562 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_15
Type: pfam
Location: 21564 - 22295 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_16
Type: TC
Location: 22304 - 22996 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_17
Type: TC
Location: 23007 - 23681 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_18
Type: TC
Location: 23703 - 25073 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_19
Type: pfam
Location: 25078 - 25863 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_20
Type: CAZyme
Location: 25841 - 26605 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_21
Type: CAZyme
Location: 26580 - 27665 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_22
Type: pfam
Location: 27662 - 28750 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_23
Type: CAZyme
Location: 28756 - 29721 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_24
Type:
Location: 29742 - 30893 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_25
Type: TC
Location: 31082 - 32497 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_26
Type: TC
Location: 32499 - 33497 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_27
Type: STP
Location: 33510 - 34610 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_28
Type: pfam
Location: 34607 - 35599 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_377_29
Type: CAZyme
Location: 35609 - 36664 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Streptococcaceae
→
Genus
Streptococcus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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