PROTEIN: ShaoY_2019_ERR3405052_bin.2_k141_377_12
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405052_bin.2_k141_377_12.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405052_bin.2_k141_377_12
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Protein Sequence
MTDGKDTLYN PTKAKAAFEK AKSELQAKGV TFPIHLDIPV EQTDVIAVQQ TNSLKQSVEA 60 VLGSENVVID VLQMTDNEKM SITSQAKVPS QKDYDLNGTG WGPDYQDPAT YLNILDAKKG 120 SALKHLGITK GKDPEVMAQV GLDEYKKLLD DAASETSDLN KRYEKYAKAQ AWVSDSSLLI 180 PVASSGGSPT VSRTVPFSKA YSQVGIKGDP FVFKGLELQN DIVTAKEYEE ALKKWQKEKI 240 ETNAKYQKEL ANHVK 255
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DR61-F1-model_v4 | 1 | 255 | 402 | 660 | 0.6038 |
0.8788 |
| AF-Q8DQB2-F1-model_v4 | 41 | 255 | 38 | 234 | 0.6027 |
0.7593 |
| AF-Q8DNI1-F1-model_v4 | 1 | 255 | 403 | 659 | 0.5986 |
0.871 |
| AF-P0A4G1-F1-model_v4 | 1 | 255 | 399 | 652 | 0.5913 |
0.8613 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8a42-assembly1.cif.gz_A | 1 | 255 | 371 | 627 | 0.6498 |
0.9315 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0A4G0-F1-model_v4 | 1 | 255 | 399 | 652 | 0.6026 |
0.8773 |
| AF-P18791-F1-model_v4 | 1 | 255 | 403 | 659 | 0.5992 |
0.8718 |
| AF-P0A4G1-F1-model_v4 | 1 | 255 | 399 | 652 | 0.5913 |
0.8613 |
| AF-P35592-F1-model_v4 | 1 | 255 | 401 | 660 | 0.5889 |
0.8575 |
| AF-P31306-F1-model_v4 | 1 | 255 | 408 | 663 | 0.5626 |
0.8192 |