Cluster: ShaoY_2019_ERR3405052_bin.2_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405052_bin.2
- CGC Family ID: CGCFAM_00401
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405052_bin.2_k141_217 | ShaoY_2019_ERR3405052_bin.2_k141_217_21 | 18745 | 22008 | + | CBM40 | GH33 |
| pfam | ShaoY_2019_ERR3405052_bin.2_k141_217 | ShaoY_2019_ERR3405052_bin.2_k141_217_22 | 22409 | 23107 | + | NanE |
| STP | ShaoY_2019_ERR3405052_bin.2_k141_217 | ShaoY_2019_ERR3405052_bin.2_k141_217_23 | 23225 | 24550 | + | SBP_bac_1 |
| TC | ShaoY_2019_ERR3405052_bin.2_k141_217 | ShaoY_2019_ERR3405052_bin.2_k141_217_24 | 24763 | 25650 | + | 3.A.1.1.20 |
| TC | ShaoY_2019_ERR3405052_bin.2_k141_217 | ShaoY_2019_ERR3405052_bin.2_k141_217_25 | 25666 | 26508 | + | 3.A.1.1.34 |
| pfam | ShaoY_2019_ERR3405052_bin.2_k141_217 | ShaoY_2019_ERR3405052_bin.2_k141_217_26 | 26709 | 27161 | + | DUF386 |
| TC | ShaoY_2019_ERR3405052_bin.2_k141_217 | ShaoY_2019_ERR3405052_bin.2_k141_217_27 | 27182 | 27832 | + | 9.B.28.1.4 |
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_217_21
Type: CAZyme
Location: 18745 - 22008 (+)
Type: CAZyme
Location: 18745 - 22008 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_217_22
Type: pfam
Location: 22409 - 23107 (+)
Type: pfam
Location: 22409 - 23107 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_217_23
Type: STP
Location: 23225 - 24550 (+)
Type: STP
Location: 23225 - 24550 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_217_24
Type: TC
Location: 24763 - 25650 (+)
Type: TC
Location: 24763 - 25650 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_217_25
Type: TC
Location: 25666 - 26508 (+)
Type: TC
Location: 25666 - 26508 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_217_26
Type: pfam
Location: 26709 - 27161 (+)
Type: pfam
Location: 26709 - 27161 (+)
Gene ID: ShaoY_2019_ERR3405052_bin.2_k141_217_27
Type: TC
Location: 27182 - 27832 (+)
Type: TC
Location: 27182 - 27832 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.