Genome Details
Selected Rep_genome_ID: SW116_3
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900553815
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| SW116_3 | 4,434,411 | 91.9% | 2.95% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| SW116_3_CGC14 | CGCFAM_00025 | Yes | 5 | 2 | pectin/alpha-glucan |
| SW116_3_CGC20 | CGCFAM_00095 | Yes | 4 | 1 | |
| SW116_3_CGC6 | CGCFAM_00101 | Yes | 11 | 8 | beta-glucan |
| SW116_3_CGC18 | CGCFAM_00110 | Yes | 7 | 4 | pectin/host glycan |
| SW116_3_CGC49 | CGCFAM_00138 | Yes | 8 | 2 | |
| SW116_3_CGC28 | CGCFAM_00148 | Yes | 7 | 5 | |
| SW116_3_CGC9 | CGCFAM_00260 | Yes | 4 | 1 | |
| SW116_3_CGC43 | CGCFAM_00265 | Yes | 4 | 1 | beta-glucan |
| SW116_3_CGC3 | CGCFAM_00296 | Yes | 11 | 5 | |
| SW116_3_CGC41 | CGCFAM_00441 | Yes | 3 | 2 | |
| SW116_3_CGC30 | CGCFAM_00525 | Yes | 6 | 2 | |
| SW116_3_CGC40 | CGCFAM_00581 | Yes | 5 | 2 | |
| SW116_3_CGC23 | CGCFAM_01517 | Yes | 7 | 2 | |
| SW116_3_CGC44 | CGCFAM_02323 | Yes | 3 | 1 | |
| SW116_3_CGC21 | CGCFAM_02326 | Yes | 6 | 4 | |
| SW116_3_CGC16 | CGCFAM_05305 | Yes | 6 | 5 | |
| SW116_3_CGC1 | CGCFAM_09179 | Yes | 4 | 1 | |
| SW116_3_CGC25 | CGCFAM_09451 | Yes | 4 | 1 | |
| SW116_3_CGC4 | CGCFAM_10782 | Yes | 5 | 1 |
Top CAZyme Families