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Cluster: SW116_3_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_145638 k141_145638_3 6676 8838 + GH89
pfam k141_145638 k141_145638_4 8844 9929 + HGSNAT_cat
CAZyme k141_145638 k141_145638_5 9926 12220 + GH92
CAZyme k141_145638 k141_145638_6 12427 13845 + GH28
CAZyme k141_145638 k141_145638_7 13860 15266 + GH28
pfam k141_145638 k141_145638_8 15306 16556 + His_Phos_2
TC k141_145638 k141_145638_9 16811 17482 - 1.A.8.13.3
NULL(UNKNOWN) k141_145638 k141_145638_10 18613 18771 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_145638 k141_145638_11 18915 21932 + 1.B.14.6.1
pfam k141_145638 k141_145638_12 21958 23631 + SusD_RagB
CAZyme k141_145638 k141_145638_13 23839 26139 + GH92
Gene ID: k141_145638_3
Type: CAZyme
Location: 6676 - 8838 (+)
Gene ID: k141_145638_4
Type: pfam
Location: 8844 - 9929 (+)
Gene ID: k141_145638_5
Type: CAZyme
Location: 9926 - 12220 (+)
Gene ID: k141_145638_6
Type: CAZyme
Location: 12427 - 13845 (+)
Gene ID: k141_145638_7
Type: CAZyme
Location: 13860 - 15266 (+)
Gene ID: k141_145638_8
Type: pfam
Location: 15306 - 16556 (+)
Gene ID: k141_145638_9
Type: TC
Location: 16811 - 17482 (-)
Gene ID: k141_145638_10
Type:
Location: 18613 - 18771 (+)
Gene ID: k141_145638_11
Type: TC
Location: 18915 - 21932 (+)
Gene ID: k141_145638_12
Type: pfam
Location: 21958 - 23631 (+)
Gene ID: k141_145638_13
Type: CAZyme
Location: 23839 - 26139 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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